RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB4632" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB4632 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23013543 23013543 PRJEB4632_P_NODE_799_length_250_cov_0.870056_g761_i0 PRJEB4632 799 250 0.870056 2.17514 Phlebiopsis gigantea 11 82310 Fungi Fungi 176 8e-51   NR KIP12906.1 745531 g761 i0 98.8 0.984 82 1 98.4 0 248 3 84 165 KIP12906.1 glycosyltransferase family 32 protein [Phlebiopsis gigantea 11061_1 CR5-6] diamond 246 176 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Phanerochaetaceae Phlebiopsis Phlebiopsis gigantea
30469419 30469419 PRJEB4632_P_NODE_953_length_243_cov_0.905882_g915_i0 PRJEB4632 953 243 0.905882 2.20129326 Polyporales 5303 Fungi Fungi 120 1.27e-29   NR KAJ3542228.1 194682 g915 i0 76.7 5.37037037037037 73 17 90.1 0 1 219 366 438 KAJ3542228.1 hypothetical protein NM688_g5996 [Phlebia brevispora] diamond 1305 121 0.991735537190083 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Meruliaceae Phlebia Phlebia brevispora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;