contig_metadata
6 rows where analysis = "diamond", bioproject = "PRJEB43370" and tax_phylum = "Foraminifera"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5162555 | 5162555 | PRJEB43370_P_NODE_7865_length_168_cov_0.873950_g7822_i0 | PRJEB43370 | 7865 | 168 | 0.87395 | 1.468236 | Reticulomyxa filosa | 46433 | SAR_Eukaryotes | SAR_Eukaryotes | 92 | 4.76e-20 | NR | ETO28688.1 | 46433 | g7822 | i0 | 70.9 | 0.982142857142857 | 55 | 16 | 98.2 | 0 | 166 | 2 | 386 | 440 | ETO28688.1 disulfide-isomerase [Reticulomyxa filosa] | diamond | 165 | 92 | 1 | Eukaryota | Sar | Foraminifera | Reticulomyxidae | Reticulomyxa | Reticulomyxa filosa | ||||
| 26589990 | 26589990 | PRJEB43370_P_NODE_7741_length_169_cov_0.866667_g7698_i0 | PRJEB43370 | 7741 | 169 | 0.866667 | 1.46466723 | Reticulomyxa filosa | 46433 | SAR_Eukaryotes | SAR_Eukaryotes | 66.2 | 6.07e-11 | NR | ETO20748.1 | 46433 | g7698 | i0 | 49.1 | 1.97041420118343 | 55 | 28 | 97.6 | 0 | 4 | 168 | 281 | 335 | ETO20748.1 hypothetical protein RFI_16469, partial [Reticulomyxa filosa] | diamond | 333 | 66.2 | 1 | Eukaryota | Sar | Foraminifera | Reticulomyxidae | Reticulomyxa | Reticulomyxa filosa | ||||
| 28353241 | 28353241 | PRJEB43370_P_NODE_6606_length_178_cov_2.418605_g6563_i0 | PRJEB43370 | 6606 | 178 | 2.418605 | 4.3051169 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 79.7 | 1.63e-17 | NR | ETO31022.1 | 46433 | g6563 | i0 | 64.9 | 1.85393258426966 | 57 | 20 | 96.1 | 0 | 171 | 1 | 6 | 62 | ETO31022.1 heat shock protein 60 [Reticulomyxa filosa] | diamond | 330 | 79.7 | 1 | Eukaryota | Sar | Foraminifera | Reticulomyxidae | Reticulomyxa | Reticulomyxa filosa | ||||
| 28833533 | 28833533 | PRJEB43370_P_NODE_6788_length_176_cov_1.637795_g6745_i0 | PRJEB43370 | 6788 | 176 | 1.637795 | 2.8825192 | Reticulomyxa filosa | 46433 | SAR_Eukaryotes | SAR_Eukaryotes | 52.8 | 2.6e-6 | NR | ETO30832.1 | 46433 | g6745 | i0 | 52.5 | 0.681818181818182 | 40 | 19 | 68.2 | 0 | 54 | 173 | 136 | 175 | ETO30832.1 poly ADP-ribose polymerase, partial [Reticulomyxa filosa] | diamond | 120 | 52.8 | 1 | Eukaryota | Sar | Foraminifera | Reticulomyxidae | Reticulomyxa | Reticulomyxa filosa | ||||
| 29970274 | 29970274 | PRJEB43370_P_NODE_9011_length_166_cov_0.888889_g8968_i0 | PRJEB43370 | 9011 | 166 | 0.888889 | 1.47555574 | Reticulomyxa filosa | 46433 | SAR_Eukaryotes | SAR_Eukaryotes | 63.2 | 3.76e-10 | NR | ETO22559.1 | 46433 | g8968 | i0 | 58 | 2.67469879518072 | 50 | 21 | 90.4 | 0 | 162 | 13 | 86 | 135 | ETO22559.1 hypothetical protein RFI_14632 [Reticulomyxa filosa] | diamond | 444 | 63.2 | 1 | Eukaryota | Sar | Foraminifera | Reticulomyxidae | Reticulomyxa | Reticulomyxa filosa | ||||
| 30728530 | 30728530 | PRJEB43370_P_NODE_3934_length_223_cov_1.494253_g3891_i0 | PRJEB43370 | 3934 | 223 | 1.494253 | 3.33218419 | Reticulomyxa filosa | 46433 | SAR_Eukaryotes | SAR_Eukaryotes | 72 | 1.25e-13 | NR | ETO13147.1 | 46433 | g3891 | i0 | 52.6 | 1.9103139013452901 | 76 | 33 | 98.2 | 2 | 3 | 221 | 1 | 76 | ETO13147.1 hypothetical protein RFI_24228 [Reticulomyxa filosa] | diamond | 426 | 72 | 1 | Eukaryota | Sar | Foraminifera | Reticulomyxidae | Reticulomyxa | Reticulomyxa filosa |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;