RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB43370" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB43370 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11193305 11193305 PRJEB43370_P_NODE_6349_length_182_cov_1.563910_g6306_i0 PRJEB43370 6349 182 1.56391 2.8463162 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 89 6.58e-19   NR MES1909605.1 1215613 g6306 i0 86.7 4.48351648351648 45 6 74.2 0 47 181 3 47 MES1909605.1 hypothetical protein [Cercozoa sp. M6MM] diamond 816 89 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
31803321 31803321 PRJEB43370_P_NODE_5977_length_187_cov_1.405797_g5934_i0 PRJEB43370 5977 187 1.405797 2.62884039 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 88.6 2.2e-19   NR ADK26624.1 323453 g5934 i0 64.5 1.98930481283422 62 22 99.5 0 1 186 185 246 ADK26624.1 elongation factor 2, partial [Heteromita sp. PRA-74] diamond 372 88.6 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
32531359 32531359 PRJEB43370_P_NODE_1499_length_356_cov_2.960912_g1456_i0 PRJEB43370 1499 356 2.960912 10.54084672 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 107 1.14e-25   NR MES1912576.1 1215613 g1456 i0 42 0.943820224719101 112 65 94.4 0 1 336 163 274 MES1912576.1 hypothetical protein [Cercozoa sp. M6MM] diamond 336 107 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;