RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJEB41113" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB41113 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17910658 17910658 PRJEB41113_S_NODE_1135_length_255_cov_6.577982_g1126_i0 PRJEB41113 1135 255 6.577982 16.7738541 Isosphaeraceae bacterium 2691532 Bacteria Bacteria 153 2.4899999999999998e-42   NR MBX6312370.1 2691532 g1126 i0 91.3 5.64705882352941 80 7 94.1 0 14 253 341 420 MBX6312370.1 preprotein translocase subunit SecY [Isosphaeraceae bacterium] diamond 1440 153 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae   Isosphaeraceae bacterium
27854708 27854708 PRJEB41113_S_NODE_3045_length_207_cov_2.670588_g3036_i0 PRJEB41113 3045 207 2.670588 5.52811716 Phycisphaerae bacterium 2026778 Bacteria Bacteria 76.6 4.93e-16   NR MBN1554494.1 2026778 g3036 i0 46.4 1 69 37 100 0 207 1 12 80 MBN1554494.1 STAS/SEC14 domain-containing protein [Phycisphaerae bacterium] diamond 207 76.6 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium
31328985 31328985 PRJEB41113_S_NODE_13756_length_152_cov_2.869565_g13747_i0 PRJEB41113 13756 152 2.869565 4.3617388 Isosphaeraceae bacterium 2691532 Bacteria Bacteria 41.2 0.0377   NR MEO6808277.1 2691532 g13747 i0 57.4 0.927631578947368 47 20 92.8 0 152 12 42 88 MEO6808277.1 MotA/TolQ/ExbB proton channel family protein [Isosphaeraceae bacterium] diamond 141 41.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae   Isosphaeraceae bacterium
31360791 31360791 PRJEB41113_S_NODE_6496_length_177_cov_4.750000_g6487_i0 PRJEB41113 6496 177 4.75 8.4075 Planctomycetota bacterium 2026780 Bacteria Bacteria 42 0.0287   NR MCU0918686.1 2026780 g6487 i0 59.3 0.457627118644068 27 11 45.8 0 87 167 486 512 MCU0918686.1 hypothetical protein [Planctomycetota bacterium] diamond 81 42 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32563064 32563064 PRJEB41113_S_NODE_9639_length_161_cov_2.274194_g9630_i0 PRJEB41113 9639 161 2.274194 3.66145234 Tautonia sociabilis 2080755 Bacteria Bacteria 56.2 2.12e-7   NR WP_126726178.1 2080755 g9630 i0 44.2 0.968944099378882 52 29 96.9 0 6 161 793 844 WP_126726178.1 ATP-binding protein [Tautonia sociabilis] diamond 156 56.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae Tautonia Tautonia sociabilis
32783055 32783055 PRJEB41113_S_NODE_9700_length_161_cov_1.564516_g9691_i0 PRJEB41113 9700 161 1.564516 2.51887076 Planctomycetota bacterium 2026780 Bacteria Bacteria 75.1 4.73e-14   NR MDB5348763.1 2026780 g9691 i0 84.6 0.726708074534162 39 6 72.7 0 161 45 768 806 MDB5348763.1 hypothetical protein [Planctomycetota bacterium] diamond 117 75.1 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;