contig_metadata
8 rows where analysis = "diamond", bioproject = "PRJEB41113" and tax_phylum = "Acidobacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27374806 | 27374806 | PRJEB41113_S_NODE_8683_length_165_cov_2.062500_g8674_i0 | PRJEB41113 | 8683 | 165 | 2.0625 | 3.403125 | Bacteria | 2 | Bacteria | Bacteria | 103 | 2.11e-26 | NR | MBA3786076.1 | 1978231 | g8674 | i0 | 94.4 | 2.94545454545455 | 54 | 3 | 98.2 | 0 | 2 | 163 | 93 | 146 | MBA3786076.1 glycosyltransferase family 2 protein [Acidobacteriota bacterium] | diamond | 486 | 103 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 28517869 | 28517869 | PRJEB41113_S_NODE_9667_length_161_cov_1.903226_g9658_i0 | PRJEB41113 | 9667 | 161 | 1.903226 | 3.06419386 | Vicinamibacterales bacterium | 2910147 | Bacteria | Bacteria | 112 | 3.33e-29 | NR | MET0164830.1 | 2910147 | g9658 | i0 | 100 | 0.987577639751553 | 53 | 0 | 98.8 | 0 | 160 | 2 | 58 | 110 | MET0164830.1 glutathione S-transferase family protein [Vicinamibacterales bacterium] | diamond | 159 | 112 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacterales bacterium | ||||
| 28612570 | 28612570 | PRJEB41113_S_NODE_9027_length_163_cov_8.182540_g9018_i0 | PRJEB41113 | 9027 | 163 | 8.18254 | 13.3375402 | Terriglobales bacterium | 2282142 | Bacteria | Bacteria | 99 | 1.37e-22 | NR | HUB01659.1 | 2282142 | g9018 | i0 | 83 | 4.85889570552147 | 53 | 9 | 97.5 | 0 | 3 | 161 | 228 | 280 | HUB01659.1 Ni/Fe hydrogenase subunit alpha [Terriglobales bacterium] | diamond | 792 | 99 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Terriglobales bacterium | ||||
| 30696843 | 30696843 | PRJEB41113_S_NODE_6254_length_179_cov_2.507042_g6245_i0 | PRJEB41113 | 6254 | 179 | 2.507042 | 4.48760518 | Vicinamibacterales bacterium | 2910147 | Bacteria | Bacteria | 96.7 | 1.62e-21 | NR | MCM3880203.1 | 2910147 | g6245 | i0 | 75 | 0.93854748603352 | 56 | 14 | 93.9 | 0 | 12 | 179 | 393 | 448 | MCM3880203.1 carboxypeptidase-like regulatory domain-containing protein [Vicinamibacterales bacterium] | diamond | 168 | 96.7 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacterales bacterium | ||||
| 31360790 | 31360790 | PRJEB41113_S_NODE_5616_length_183_cov_3.650685_g5607_i0 | PRJEB41113 | 5616 | 183 | 3.650685 | 6.68075355 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 115 | 3.11e-28 | NR | MEO7674389.1 | 2283092 | g5607 | i0 | 93.2 | 4.78688524590164 | 59 | 4 | 96.7 | 0 | 182 | 6 | 68 | 126 | MEO7674389.1 serine/threonine protein kinase [Pyrinomonadaceae bacterium] | diamond | 876 | 115 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 32151514 | 32151514 | PRJEB41113_S_NODE_8658_length_165_cov_2.578125_g8649_i0 | PRJEB41113 | 8658 | 165 | 2.578125 | 4.25390625 | Terriglobus roseus | 392734 | Bacteria | Bacteria | 91.3 | 2e-20 | NR | WP_083346625.1 | 392734 | g8649 | i0 | 83.3 | 1.96363636363636 | 54 | 9 | 98.2 | 0 | 164 | 3 | 110 | 163 | WP_083346625.1 DUF58 domain-containing protein [Terriglobus roseus] | diamond | 324 | 91.3 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Terriglobus | Terriglobus roseus | ||
| 32373109 | 32373109 | PRJEB41113_S_NODE_3459_length_201_cov_6.926829_g3450_i0 | PRJEB41113 | 3459 | 201 | 6.926829 | 13.92292629 | Blastocatellia bacterium | 2052146 | Bacteria | Bacteria | 65.1 | 2.83e-10 | NR | HKQ91664.1 | 2052146 | g3450 | i0 | 58.6 | 1.04477611940298 | 70 | 23 | 98.5 | 2 | 201 | 4 | 183 | 250 | HKQ91664.1 TIGR00366 family protein [Blastocatellia bacterium] | diamond | 210 | 65.1 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellia bacterium | |||||
| 32625687 | 32625687 | PRJEB41113_S_NODE_6980_length_174_cov_5.270073_g6971_i0 | PRJEB41113 | 6980 | 174 | 5.270073 | 9.16992702 | Thermoanaerobaculia bacterium | 2651171 | Bacteria | Bacteria | 40 | 0.0324 | NR | HSY50073.1 | 2651171 | g6971 | i0 | 61.5 | 0.448275862068966 | 26 | 10 | 44.8 | 0 | 71 | 148 | 48 | 73 | HSY50073.1 DUF4160 domain-containing protein [Thermoanaerobaculia bacterium] | diamond | 78 | 40 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Thermoanaerobaculia | Thermoanaerobaculia bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;