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contig_metadata

21 rows where analysis = "diamond", bioproject = "PRJEB41113" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 21 ✖

bioproject 1

  • PRJEB41113 · 21 ✖

analysis 1

  • diamond · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10261908 10261908 PRJEB41113_S_NODE_13129_length_153_cov_0.965517_g13120_i0 PRJEB41113 13129 153 0.965517 1.47724101 Candidatus Magasanikbacteria bacterium CG11_big_fil_rev_8_21_14_ 2026717 Bacteria Bacteria 69.7 2.93e-12   NR PIR03435.1 1974654 g13120 i0 88.6 0.686274509803922 35 4 68.6 0 153 49 326 360 PIR03435.1 MAG: redox-regulated ATPase YchF [Candidatus Magasanikbacteria bacterium CG11_big_fil_rev_8_21_14_0_20_43_7] diamond 105 69.7 1 Bacteria Bacteria candidate phyla   Candidatus Magasanikiibacteriota         Candidatus Magasanikbacteria bacterium CG11_big_fil_rev_8_21_14_0_20_43_7
24284955 24284955 PRJEB41113_S_NODE_4560_length_190_cov_8.614379_g4551_i0 PRJEB41113 4560 190 8.614379 16.3673201 Bacteria 2 Bacteria Bacteria 111 1.29e-26   NR MBU3934885.1 2052139 g4551 i0 85.5 7.68947368421053 62 9 97.9 0 3 188 153 214 MBU3934885.1 sodium-translocating pyrophosphatase [Patescibacteria group bacterium] diamond 1461 111 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
26646674 26646674 PRJEB41113_S_NODE_4461_length_191_cov_2.266234_g4452_i0 PRJEB41113 4461 191 2.266234 4.32850694 Bacteria 2 Bacteria Bacteria 121 2.94e-30   NR TWP08753.1 713052 g4452 i0 100 1.75916230366492 56 0 88 0 189 22 213 268 TWP08753.1 hypothetical protein EUA76_00050 [TM7 phylum sp. oral taxon 350] diamond 336 121 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         TM7 phylum sp. oral taxon 350
27381303 27381303 PRJEB41113_S_NODE_923_length_267_cov_2.552174_g914_i0 PRJEB41113 923 267 2.552174 6.81430458 candidate division Kazan bacterium 2202143 Bacteria Bacteria 43.1 0.0108   NR RLC36635.1 2202143 g914 i0 37.3 0.573033707865168 51 29 56.2 2 5 154 28 76 RLC36635.1 MAG: hypothetical protein DRH29_04175 [candidate division Kazan bacterium] diamond 153 43.1 1 Bacteria Bacteria candidate phyla             candidate division Kazan bacterium
27444587 27444587 PRJEB41113_S_NODE_7723_length_170_cov_2.300752_g7714_i0 PRJEB41113 7723 170 2.300752 3.9112784 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 48.9 9.19e-5   NR NBP55078.1 2802965 g7714 i0 53.8 0.688235294117647 39 18 68.8 0 154 38 408 446 NBP55078.1 hypothetical protein [Candidatus Elulimicrobium humile] diamond 117 48.9 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile
27823361 27823361 PRJEB41113_S_NODE_10624_length_158_cov_2.528926_g10615_i0 PRJEB41113 10624 158 2.528926 3.99570308 Patescibacteria group bacterium 2052139 Bacteria Bacteria 83.2 4.55e-19   NR HKC14642.1 2052139 g10615 i0 80.8 0.987341772151899 52 10 98.7 0 156 1 49 100 HKC14642.1 oligosaccharide flippase family protein [Patescibacteria group bacterium] diamond 156 83.2 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
27942921 27942921 PRJEB41113_S_NODE_2705_length_212_cov_3.154286_g2696_i0 PRJEB41113 2705 212 3.154286 6.68708632 Pseudomonadati 3379134 Bacteria Bacteria 55.8 5.27e-7   NR OGZ00125.1 1798650 g2696 i0 54.1 2.85849056603774 61 24 80.7 2 176 6 109 169 OGZ00125.1 MAG: hypothetical protein A2945_00335 [Candidatus Liptonbacteria bacterium RIFCSPLOWO2_01_FULL_52_25] diamond 606 55.8 1 Bacteria Bacteria candidate phyla   Candidatus Liptoniibacteriota         Candidatus Liptonbacteria bacterium RIFCSPLOWO2_01_FULL_52_25
28265035 28265035 PRJEB41113_S_NODE_11466_length_156_cov_0.932773_g11457_i0 PRJEB41113 11466 156 0.932773 1.45512588 Patescibacteria group bacterium 2052139 Bacteria Bacteria 51.6 8e-6   NR MEK7471990.1 2052139 g11457 i0 83.9 0.596153846153846 31 5 59.6 0 5 97 285 315 MEK7471990.1 permease-like cell division protein FtsX [Patescibacteria group bacterium] diamond 93 51.6 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28265036 28265036 PRJEB41113_S_NODE_11686_length_155_cov_4.745763_g11677_i0 PRJEB41113 11686 155 4.745763 7.35593265 Patescibacteria group bacterium 2052139 Bacteria Bacteria 79.7 6.93e-16   NR MEK7060904.1 2052139 g11677 i0 66.7 0.987096774193548 51 17 98.7 0 1 153 133 183 MEK7060904.1 oligosaccharide flippase family protein [Patescibacteria group bacterium] diamond 153 79.7 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28296670 28296670 PRJEB41113_S_NODE_8106_length_168_cov_1.992366_g8097_i0 PRJEB41113 8106 168 1.992366 3.34717488 Patescibacteria group bacterium 2052139 Bacteria Bacteria 84.7 2.05e-18   NR MEK7092751.1 2052139 g8097 i0 72.7 0.982142857142857 55 15 98.2 0 167 3 166 220 MEK7092751.1 ABC transporter permease [Patescibacteria group bacterium] diamond 165 84.7 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28896564 28896564 PRJEB41113_S_NODE_3128_length_205_cov_14.166667_g3119_i0 PRJEB41113 3128 205 14.166667 29.04166735 Candidatus Curtissbacteria bacterium 2750075 Bacteria Bacteria 95.1 4.6e-23   NR MDZ4209704.1 2750075 g3119 i0 64.7 0.995121951219512 68 24 99.5 0 205 2 51 118 MDZ4209704.1 class I SAM-dependent methyltransferase [Candidatus Curtissbacteria bacterium] diamond 204 95.1 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium
28896566 28896566 PRJEB41113_S_NODE_608_length_292_cov_5.364706_g599_i0 PRJEB41113 608 292 5.364706 15.66494152 Candidatus Levyibacteriota bacterium 2052151 Bacteria Bacteria 124 1.54e-32   NR MBI2032999.1 2052151 g599 i0 58.9 0.976027397260274 95 38 96.6 1 292 11 117 211 MBI2032999.1 sulfatase-like hydrolase/transferase [Candidatus Levyibacteriota bacterium] diamond 285 124 1 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levyibacteriota bacterium
29528262 29528262 PRJEB41113_S_NODE_6530_length_177_cov_3.142857_g6521_i0 PRJEB41113 6530 177 3.142857 5.56285689 Patescibacteria group bacterium 2052139 Bacteria Bacteria 104 3.76e-25   NR HKC15047.1 2052139 g6521 i0 100 0.915254237288136 54 0 91.5 0 164 3 70 123 HKC15047.1 DNA recombination protein RmuC [Patescibacteria group bacterium] diamond 162 104 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
30791718 30791718 PRJEB41113_S_NODE_7334_length_172_cov_4.303704_g7325_i0 PRJEB41113 7334 172 4.303704 7.40237088 bacterium (Candidatus Gribaldobacteria) CG_4_1 2798521 Bacteria Bacteria 61.2 1.25e-10   NR PJA01995.1 2014264 g7325 i0 63 0.802325581395349 46 16 80.2 1 3 140 29 73 PJA01995.1 MAG: hypothetical protein COX73_03085 [bacterium (Candidatus Gribaldobacteria) CG_4_10_14_0_2_um_filter_36_18] diamond 138 61.2 1 Bacteria Bacteria candidate phyla   Candidatus Gribaldobacteria         bacterium (Candidatus Gribaldobacteria) CG_4_10_14_0_2_um_filter_36_18
31170650 31170650 PRJEB41113_S_NODE_6915_length_175_cov_1.681159_g6906_i0 PRJEB41113 6915 175 1.681159 2.94202825 Patescibacteria group bacterium 2052139 Bacteria Bacteria 103 1.14e-25   NR MEK7092751.1 2052139 g6906 i0 77.2 1.95428571428571 57 13 97.7 0 172 2 116 172 MEK7092751.1 ABC transporter permease [Patescibacteria group bacterium] diamond 342 103 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31392448 31392448 PRJEB41113_S_NODE_13836_length_152_cov_1.895652_g13827_i0 PRJEB41113 13836 152 1.895652 2.88139104 Candidatus Saccharibacteria bacterium 2026720 Bacteria Bacteria 89.4 1.58e-20   NR TAH32389.1 2026720 g13827 i0 78 0.986842105263158 50 11 98.7 0 152 3 103 152 TAH32389.1 MAG: hypothetical protein EYC59_05965 [Candidatus Saccharibacteria bacterium] diamond 150 89.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
31392452 31392452 PRJEB41113_S_NODE_6216_length_179_cov_5.225352_g6207_i0 PRJEB41113 6216 179 5.225352 9.35338008 Candidatus Delongbacteria bacterium 2044594 Bacteria Bacteria 81.6 1.49e-16   NR MBN2857782.1 2044594 g6207 i0 67.3 1.89385474860335 55 18 92.2 0 8 172 79 133 MBN2857782.1 IS30 family transposase [Candidatus Delongbacteria bacterium] diamond 339 81.6 1 Bacteria Bacteria candidate phyla   Candidatus Delongiibacteriota         Candidatus Delongbacteria bacterium
31740021 31740021 PRJEB41113_S_NODE_9537_length_161_cov_5.096774_g9528_i0 PRJEB41113 9537 161 5.096774 8.20580614 Minisyncoccota bacterium 2053589 Bacteria Bacteria 87 1.71e-18   NR HEY4484606.1 2053589 g9528 i0 85.1 1.73291925465839 47 7 87.6 0 1 141 300 346 HEY4484606.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 279 87 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31961559 31961559 PRJEB41113_S_NODE_10058_length_160_cov_1.544715_g10049_i0 PRJEB41113 10058 160 1.544715 2.471544 Candidatus Aminicenantales bacterium 3090891 Bacteria Bacteria 48.9 2.18e-5   NR MFQ6108474.1 3090891 g10049 i0 50 0.9 48 24 90 0 16 159 52 99 MFQ6108474.1 RrF2 family transcriptional regulator [Candidatus Aminicenantales bacterium] diamond 144 48.9 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota Candidatus Aminicenantia Candidatus Aminicenantales     Candidatus Aminicenantales bacterium
32214857 32214857 PRJEB41113_S_NODE_12438_length_154_cov_1.094017_g12429_i0 PRJEB41113 12438 154 1.094017 1.68478618 Patescibacteria group bacterium 2052139 Bacteria Bacteria 67.4 2.13e-11   NR HZQ30029.1 2052139 g12429 i0 70.2 0.915584415584416 47 14 91.6 0 6 146 297 343 HZQ30029.1 MDR family MFS transporter [Patescibacteria group bacterium] diamond 141 67.4 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
32341545 32341545 PRJEB41113_S_NODE_2419_length_217_cov_6.944444_g2410_i0 PRJEB41113 2419 217 6.944444 15.06944348 Candidatus Shapirobacteria bacterium CG 2053613 Bacteria Bacteria 104 2.24e-27   NR PIS14719.1 1974885 g2410 i0 76.5 0.940092165898618 68 16 94 0 206 3 11 78 PIS14719.1 MAG: hypothetical protein COT64_01135 [Candidatus Shapirobacteria bacterium CG09_land_8_20_14_0_10_39_12] diamond 204 104 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium CG09_land_8_20_14_0_10_39_12

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;