contig_metadata
10 rows where analysis = "diamond", bioproject = "PRJEB39643" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27033353 | 27033353 | PRJEB39643_P_NODE_27262_length_351_cov_2.215827_g27069_i0 | PRJEB39643 | 27262 | 351 | 2.215827 | 7.77755277 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 87.8 | 1.59e-19 | NR | MCU0648862.1 | 2026741 | g27069 | i0 | 43.6 | 0.803418803418803 | 94 | 53 | 80.3 | 0 | 283 | 2 | 4 | 97 | MCU0648862.1 DUF6228 family protein [Gemmatimonadaceae bacterium] | diamond | 282 | 87.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 27374799 | 27374799 | PRJEB39643_P_NODE_69223_length_276_cov_1.517241_g69030_i0 | PRJEB39643 | 69223 | 276 | 1.517241 | 4.18758516 | Gemmatimonas | 173479 | Bacteria | Bacteria | 112 | 1.67e-27 | NR | OLE14631.1 | 1805208 | g69030 | i0 | 87.3 | 16.7391304347826 | 55 | 7 | 59.8 | 0 | 111 | 275 | 1 | 55 | OLE14631.1 MAG: alkanesulfonate monooxygenase, partial [Gemmatimonas sp. 13_1_20CM_3_60_15] | diamond | 4620 | 112 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas sp. 13_1_20CM_3_60_15 | |
| 28296579 | 28296579 | PRJEB39643_P_NODE_121166_length_251_cov_4.325843_g120973_i0 | PRJEB39643 | 121166 | 251 | 4.325843 | 10.857865930000001 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 43.5 | 0.0218 | NR | HYF39979.1 | 2448054 | g120973 | i0 | 37.3 | 0.99203187250996006 | 83 | 46 | 92 | 1 | 16 | 246 | 479 | 561 | HYF39979.1 DNA polymerase/3'-5' exonuclease PolX [Gemmatimonadales bacterium] | diamond | 249 | 43.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 28549504 | 28549504 | PRJEB39643_P_NODE_131067_length_248_cov_1.760000_g130874_i0 | PRJEB39643 | 131067 | 248 | 1.76 | 4.3648 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 57.8 | 1.67e-7 | NR | MCC7002625.1 | 2026741 | g130874 | i0 | 40.7 | 1.04032258064516 | 86 | 45 | 99.2 | 3 | 248 | 3 | 19 | 102 | MCC7002625.1 serine/threonine protein kinase [Gemmatimonadaceae bacterium] | diamond | 258 | 57.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 28959997 | 28959997 | PRJEB39643_P_NODE_153648_length_232_cov_3.849057_g153455_i0 | PRJEB39643 | 153648 | 232 | 3.849057 | 8.92981224 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 43.9 | 0.0128 | NR | MEP6689992.1 | 2026741 | g153455 | i0 | 42 | 0.892241379310345 | 69 | 28 | 73.7 | 3 | 11 | 181 | 181 | 249 | MEP6689992.1 glycoside hydrolase family 15 protein [Gemmatimonadaceae bacterium] | diamond | 207 | 43.9 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 29149645 | 29149645 | PRJEB39643_P_NODE_38849_length_301_cov_2.026316_g38656_i0 | PRJEB39643 | 38849 | 301 | 2.026316 | 6.09921116 | Longimicrobiales bacterium | 2910168 | Bacteria | Bacteria | 125 | 4.58e-34 | NR | HEX6065287.1 | 2910168 | g38656 | i0 | 60.8 | 2.91029900332226 | 97 | 38 | 96.7 | 0 | 1 | 291 | 75 | 171 | HEX6065287.1 hypothetical protein [Longimicrobiales bacterium] | diamond | 876 | 125 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiales bacterium | |||
| 29938724 | 29938724 | PRJEB39643_P_NODE_153931_length_231_cov_4.746835_g153738_i0 | PRJEB39643 | 153931 | 231 | 4.746835 | 10.96518885 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 93.2 | 4.51e-21 | NR | MEO6527036.1 | 2026741 | g153738 | i0 | 65.7 | 2.76623376623377 | 70 | 24 | 90.9 | 0 | 221 | 12 | 70 | 139 | MEO6527036.1 DUF4386 domain-containing protein [Gemmatimonadaceae bacterium] | diamond | 639 | 93.2 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 30823267 | 30823267 | PRJEB39643_P_NODE_21474_length_393_cov_1.984375_g21281_i0 | PRJEB39643 | 21474 | 393 | 1.984375 | 7.79859375 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 52.4 | 7.37e-5 | NR | MFN2433205.1 | 2026742 | g21281 | i0 | 42.9 | 0.427480916030534 | 56 | 32 | 42.7 | 0 | 286 | 119 | 146 | 201 | MFN2433205.1 tetratricopeptide repeat protein [Gemmatimonadota bacterium] | diamond | 168 | 52.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 32024898 | 32024898 | PRJEB39643_P_NODE_152138_length_237_cov_2.817073_g151945_i0 | PRJEB39643 | 152138 | 237 | 2.817073 | 6.67646301 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 58.2 | 1.25e-7 | NR | HEU4954254.1 | 2448054 | g151945 | i0 | 47.8 | 2.60759493670886 | 67 | 35 | 84.8 | 0 | 27 | 227 | 54 | 120 | HEU4954254.1 M13 family metallopeptidase [Gemmatimonadales bacterium] | diamond | 618 | 58.2 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 32056431 | 32056431 | PRJEB39643_P_NODE_114998_length_254_cov_1.701657_g114805_i0 | PRJEB39643 | 114998 | 254 | 1.701657 | 4.32220878 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 68.2 | 2.37e-12 | NR | MEP6766756.1 | 2026741 | g114805 | i0 | 69.8 | 0.625984251968504 | 53 | 16 | 62.6 | 0 | 161 | 3 | 41 | 93 | MEP6766756.1 hypothetical protein [Gemmatimonadaceae bacterium] | diamond | 159 | 68.2 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;