RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB39643" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB39643 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32436451 32436451 PRJEB39643_P_NODE_147959_length_242_cov_0.911243_g147766_i0 PRJEB39643 147959 242 0.911243 2.20520806 Bigelowiella natans 227086 SAR_Eukaryotes SAR_Eukaryotes 58.5 5.68e-8   NR AAT09082.1 227086 g147766 i0 41.6 0.954545454545455 77 40 95.5 1 3 233 54 125 AAT09082.1 glutathione-s-transferase [Bigelowiella natans] diamond 231 58.5 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Bigelowiella Bigelowiella natans
32587860 32587860 PRJEB39643_P_NODE_157919_length_224_cov_4.794702_g157725_i0 PRJEB39643 157919 224 4.794702 10.74013248 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 69.3 2.85e-12   NR MES1906886.1 1215613 g157725 i0 45.9 2.93303571428571 74 40 99.1 0 223 2 138 211 MES1906886.1 hypothetical protein [Cercozoa sp. M6MM] diamond 657 69.7 0.994261119081779 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;