RNAquarium Metadata Server
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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJEB39643" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB39643 · 11 ✖

analysis 1

  • diamond · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2264716 2264716 PRJEB39643_P_NODE_20022_length_407_cov_6.562874_g19829_i0 PRJEB39643 20022 407 6.562874 26.71089718 Paralvinella palmiformis 53620 Annelida Annelida 203 3.31e-63   NR KAK2149584.1 53620 g19829 i0 75.6 38.3218673218673 131 31 95.8 1 392 3 56 186 KAK2149584.1 hypothetical protein LSH36_445g00065 [Paralvinella palmiformis] diamond 15597 204 0.995098039215686 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
12468397 12468397 PRJEB39643_P_NODE_102830_length_260_cov_1.647059_g102637_i0 PRJEB39643 102830 260 1.647059 4.2823534 Owenia fusiformis 6347 Annelida Annelida 110 1.81e-26   NR CAH1773728.1 6347 g102637 i0 64.9 0.853846153846154 74 24 83.1 1 216 1 299 372 CAH1773728.1 unnamed protein product, partial [Owenia fusiformis] diamond 222 110 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
27917726 27917726 PRJEB39643_P_NODE_16505_length_453_cov_1.621053_g16312_i0 PRJEB39643 16505 453 1.621053 7.34337009 Paralvinella palmiformis 53620 Annelida Annelida 113 3.36e-28   NR KAK2168275.1 53620 g16312 i0 42.7 3.66225165562914 131 73 85.4 1 389 3 23 153 KAK2168275.1 hypothetical protein LSH36_18g00034 [Paralvinella palmiformis] diamond 1659 113 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
28226694 28226694 PRJEB39643_P_NODE_43946_length_289_cov_2.425926_g43753_i0 PRJEB39643 43946 289 2.425926 7.01092614 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 43.9 0.026   NR KAK2180971.1 27915 g43753 i0 32.4 2.03460207612457 108 39 94.5 3 15 287 1542 1632 KAK2180971.1 hypothetical protein NP493_419g08064 [Ridgeia piscesae] diamond 588 43.9 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae
28574229 28574229 PRJEB39643_P_NODE_76207_length_272_cov_3.065327_g76014_i0 PRJEB39643 76207 272 3.065327 8.33768944 Metazoa 33208 Annelida Annelida 72.4 1.96e-12   NR ELT89087.1 283909 g76014 i0 45.4 5.15073529411765 97 46 99.3 3 270 1 376 472 ELT89087.1 hypothetical protein CAPTEDRAFT_193806 [Capitella teleta] diamond 1401 72.4 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta
29212540 29212540 PRJEB39643_P_NODE_132549_length_247_cov_1.770115_g132356_i0 PRJEB39643 132549 247 1.770115 4.37218405 Dimorphilus gyrociliatus 2664684 Annelida Annelida 78.6 9.36e-15   NR CAD5117522.1 2664684 g132356 i0 49.4 2.89068825910931 79 34 91.1 2 19 243 86 162 CAD5117522.1 DgyrCDS6289 [Dimorphilus gyrociliatus] diamond 714 78.6 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Dinophilidae Dimorphilus Dimorphilus gyrociliatus
30311671 30311671 PRJEB39643_P_NODE_94472_length_264_cov_1.612565_g94279_i0 PRJEB39643 94472 264 1.612565 4.2571716 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 107 5.64e-25   NR XP_009011832.1 6412 g94279 i0 59.5 7.40909090909091 84 33 94.3 1 254 6 147 230 XP_009011832.1 hypothetical protein HELRODRAFT_185311 [Helobdella robusta] diamond 1956 108 0.990740740740741 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
30949832 30949832 PRJEB39643_P_NODE_31714_length_328_cov_5.066667_g31521_i0 PRJEB39643 31714 328 5.066667 16.61866776 Ridgeia piscesae 27915 Annelida Annelida 53.5 1.41e-5   NR KAK2177332.1 27915 g31521 i0 46.4 0.63109756097561 69 37 63.1 0 13 219 198 266 KAK2177332.1 hypothetical protein NP493_607g01025 [Ridgeia piscesae] diamond 207 53.5 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae
31012887 31012887 PRJEB39643_P_NODE_86675_length_267_cov_2.448454_g86482_i0 PRJEB39643 86675 267 2.448454 6.53737218 Owenia fusiformis 6347 Annelida Annelida 49.7 7.63e-5   NR CAH1791783.1 6347 g86482 i0 67.7 1.73033707865169 31 10 34.8 0 95 3 90 120 CAH1791783.1 unnamed protein product [Owenia fusiformis] diamond 462 49.7 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
31360690 31360690 PRJEB39643_P_NODE_118096_length_253_cov_1.711111_g117903_i0 PRJEB39643 118096 253 1.711111 4.32911083 Owenia fusiformis 6347 Annelida Annelida 54.3 3.61e-6   NR CAH1775845.1 6347 g117903 i0 40.7 1.94466403162055 81 30 96 3 251 9 6839 6901 CAH1775845.1 unnamed protein product, partial [Owenia fusiformis] diamond 492 54.3 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
31575510 31575510 PRJEB39643_P_NODE_99376_length_261_cov_2.127660_g99183_i0 PRJEB39643 99376 261 2.12766 5.5531926 Metazoa 33208 Annelida Annelida 86.3 2.26e-17   NR CAH1783192.1 6347 g99183 i0 50 4.89655172413793 66 33 75.9 0 63 260 1090 1155 CAH1783192.1 unnamed protein product [Owenia fusiformis] diamond 1278 86.7 0.995386389850058 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;