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contig_metadata

27 rows where analysis = "diamond", bioproject = "PRJEB39269" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 27 ✖

tax_kingdom 1

bioproject 1

  • PRJEB39269 · 27 ✖

analysis 1

  • diamond · 27 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
57138 57138 PRJEB39269_P_NODE_81481_length_158_cov_1.033613_g81076_i0 PRJEB39269 81481 158 1.033613 1.63310854 Myxococcales 29 Bacteria Bacteria 60.8 2.82e-9   NR HEY0881086.1 1872627 g81076 i0 64.7 3.81645569620253 51 18 96.8 0 156 4 190 240 HEY0881086.1 3-oxoacyl-[acyl-carrier-protein] reductase [Archangium sp.] diamond 603 60.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium sp.
26716398 26716398 PRJEB39269_P_NODE_29441_length_256_cov_1.502304_g29036_i0 PRJEB39269 29441 256 1.502304 3.84589824 Polyangium fumosum 889272 Bacteria Bacteria 72.4 1.13e-13   NR WP_136935045.1 889272 g29036 i0 61.5 1.21875 52 20 60.9 0 254 99 111 162 WP_136935045.1 hypothetical protein [Polyangium fumosum] diamond 312 72.4 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Polyangium Polyangium fumosum
26875430 26875430 PRJEB39269_P_NODE_5501_length_573_cov_5.741573_g5138_i0 PRJEB39269 5501 573 5.741573 32.89921329 Myxococcales bacterium 2026763 Bacteria Bacteria 48.5 0.00223   NR HTO98605.1 2026763 g5138 i0 31.1 0.554973821989529 106 51 48.7 4 552 274 33 129 HTO98605.1 Hsp20/alpha crystallin family protein [Myxococcales bacterium] diamond 318 48.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
27317983 27317983 PRJEB39269_P_NODE_66783_length_170_cov_3.091603_g66378_i0 PRJEB39269 66783 170 3.091603 5.2557251 Myxococcales bacterium 68-2 2026763 Bacteria Bacteria 45.8 1.07e-4   NR OJY30211.1 1895795 g66378 i0 52.9 0.9 51 22 90 1 169 17 2 50 OJY30211.1 MAG: hypothetical protein BGO98_26080 [Myxococcales bacterium 68-20] diamond 153 45.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium 68-20
27602230 27602230 PRJEB39269_P_NODE_70564_length_167_cov_2.351562_g70159_i0 PRJEB39269 70564 167 2.351562 3.92710854 Polyangiaceae bacterium 2268199 Bacteria Bacteria 55.5 1.64e-8   NR HVZ31771.1 2268199 g70159 i0 52.2 0.826347305389222 46 22 82.6 0 30 167 5 50 HVZ31771.1 hypothetical protein [Polyangiaceae bacterium] diamond 138 55.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
27602232 27602232 PRJEB39269_P_NODE_79024_length_159_cov_2.916667_g78619_i0 PRJEB39269 79024 159 2.916667 4.63750053 Myxococcaceae bacterium 2484252 Bacteria Bacteria 45.4 7.33e-4   NR MDB5217040.1 2484252 g78619 i0 62.5 0.452830188679245 24 9 45.3 0 151 80 137 160 MDB5217040.1 hypothetical protein [Myxococcaceae bacterium] diamond 72 45.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
27690565 27690565 PRJEB39269_P_NODE_59544_length_179_cov_1.171429_g59139_i0 PRJEB39269 59544 179 1.171429 2.09685791 Pseudomonadati 3379134 Bacteria Bacteria 60.5 2.13e-10   NR HXS18576.1 2268199 g59139 i0 100 5.16201117318436 28 0 46.9 0 3 86 40 67 HXS18576.1 DUF3612 domain-containing protein [Polyangiaceae bacterium] diamond 924 60.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
27753551 27753551 PRJEB39269_P_NODE_51764_length_191_cov_1.335526_g51359_i0 PRJEB39269 51764 191 1.335526 2.55085466 Pseudomonadati 3379134 Bacteria Bacteria 86.7 2.52e-19   NR MBI1997099.1 2026735 g51359 i0 57.1 9.95811518324607 63 27 99 0 1 189 109 171 MBI1997099.1 archaemetzincin family Zn-dependent metalloprotease [Deltaproteobacteria bacterium] diamond 1902 87.4 0.991990846681922 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28012695 28012695 PRJEB39269_P_NODE_32085_length_244_cov_1.800000_g31680_i0 PRJEB39269 32085 244 1.8 4.392 Myxococcota bacterium 2818507 Bacteria Bacteria 65.9 2.46e-10   NR MEN8183890.1 2818507 g31680 i0 43.9 3.87295081967213 66 37 81.1 0 202 5 1 66 MEN8183890.1 aromatic ring-hydroxylating dioxygenase subunit alpha [Myxococcota bacterium] diamond 945 65.9 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
28107126 28107126 PRJEB39269_P_NODE_89265_length_151_cov_3.321429_g88860_i0 PRJEB39269 89265 151 3.321429 5.01535779 Myxococcaceae bacterium 2484252 Bacteria Bacteria 87 2.4e-18   NR MDB5214851.1 2484252 g88860 i0 85.7 0.973509933774834 49 7 97.4 0 1 147 382 430 MDB5214851.1 hypothetical protein [Myxococcaceae bacterium] diamond 147 87 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
28201759 28201759 PRJEB39269_P_NODE_46026_length_202_cov_1.668712_g45621_i0 PRJEB39269 46026 202 1.668712 3.37079824 Byssovorax sp. 2927945 Bacteria Bacteria 77.4 2.77e-16   NR MFS8064965.1 2927945 g45621 i0 57.9 0.846534653465347 57 24 84.7 0 31 201 62 118 MFS8064965.1 hypothetical protein [Byssovorax sp.] diamond 171 77.4 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Byssovorax Byssovorax sp.
28264931 28264931 PRJEB39269_P_NODE_8526_length_474_cov_1.494253_g8128_i0 PRJEB39269 8526 474 1.494253 7.08275922 Archangium sp. 1872627 Bacteria Bacteria 63.9 1.46e-8   NR MDP2270461.1 1872627 g8128 i0 37.6 0.740506329113924 117 61 72.8 3 458 114 271 377 MDP2270461.1 serine protease [Archangium sp.] diamond 351 63.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium sp.
28612461 28612461 PRJEB39269_P_NODE_64427_length_172_cov_2.240602_g64022_i0 PRJEB39269 64427 172 2.240602 3.85383544 Myxococcota bacterium 2818507 Bacteria Bacteria 94 8.709999999999999e-23   NR MEO1482256.1 2818507 g64022 i0 79.6 1.67441860465116 49 10 85.5 0 148 2 3 51 MEO1482256.1 GCN5 family acetyltransferase [Myxococcota bacterium] diamond 288 94 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
28770239 28770239 PRJEB39269_P_NODE_89327_length_151_cov_2.866071_g88922_i0 PRJEB39269 89327 151 2.866071 4.32776721 Labilithrix sp. 1971228 Bacteria Bacteria 75.9 7.97e-15   NR HEY8079817.1 1971228 g88922 i0 52.7 2.94039735099338 74 11 99.3 1 150 1 12 85 HEY8079817.1 uracil phosphoribosyltransferase [Labilithrix sp.] diamond 444 75.9 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
29054606 29054606 PRJEB39269_P_NODE_40108_length_217_cov_1.449438_g39703_i0 PRJEB39269 40108 217 1.449438 3.14528046 Polyangiaceae bacterium 2268199 Bacteria Bacteria 44.3 0.00707   NR HEY5147220.1 2268199 g39703 i0 38.7 0.857142857142857 62 37 84.3 1 188 6 85 146 HEY5147220.1 LD-carboxypeptidase [Polyangiaceae bacterium] diamond 186 44.3 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
30001914 30001914 PRJEB39269_P_NODE_14711_length_366_cov_1.697248_g14306_i0 PRJEB39269 14711 366 1.697248 6.21192768 Cystobacter fuscus 43 Bacteria Bacteria 119 1.11e-29   NR WNG16887.1 43 g14306 i0 57.3 1.45901639344262 89 38 73 0 2 268 259 347 WNG16887.1 alpha/beta hydrolase [Cystobacter fuscus] diamond 534 119 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Cystobacter Cystobacter fuscus
30191205 30191205 PRJEB39269_P_NODE_67612_length_170_cov_2.419847_g67207_i0 PRJEB39269 67612 170 2.419847 4.1137399 Labilithrix sp. 1971228 Bacteria Bacteria 47 4.41e-4   NR MDB4933499.1 1971228 g67207 i0 80.8 0.458823529411765 26 5 45.9 0 2 79 386 411 MDB4933499.1 peroxidase [Labilithrix sp.] diamond 78 47 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
30222841 30222841 PRJEB39269_P_NODE_29032_length_258_cov_1.123288_g28627_i0 PRJEB39269 29032 258 1.123288 2.89808304 Anaeromyxobacteraceae bacterium 2510643 Bacteria Bacteria 72.4 1.6e-12   NR HVP66227.1 2510643 g28627 i0 50 1.7906976744186 82 37 95.3 1 3 248 464 541 HVP66227.1 PKD domain-containing protein [Anaeromyxobacteraceae bacterium] diamond 462 72.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae   Anaeromyxobacteraceae bacterium
30254812 30254812 PRJEB39269_P_NODE_67092_length_170_cov_2.770992_g66687_i0 PRJEB39269 67092 170 2.770992 4.7106864 Myxococcaceae bacterium 2484252 Bacteria Bacteria 43.5 0.00747   NR MDB5218906.1 2484252 g66687 i0 76.9 0.458823529411765 26 6 45.9 0 93 170 126 151 MDB5218906.1 hypothetical protein [Myxococcaceae bacterium] diamond 78 43.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
30412793 30412793 PRJEB39269_P_NODE_88393_length_152_cov_1.548673_g87988_i0 PRJEB39269 88393 152 1.548673 2.35398296 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 77.4 4.16e-16   NR MBI3758952.1 2026735 g87988 i0 68 0.986842105263158 50 16 98.7 0 3 152 34 83 MBI3758952.1 TolC family protein [Deltaproteobacteria bacterium] diamond 150 77.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30943174 30943174 PRJEB39269_P_NODE_67314_length_170_cov_2.625954_g66909_i0 PRJEB39269 67314 170 2.625954 4.4641218 Bacteria 2 Bacteria Bacteria 54.3 1.13e-6   NR MEA2750805.1 2026763 g66909 i0 100 1.83529411764706 26 0 45.9 0 169 92 62 87 MEA2750805.1 PmbA protein [Myxococcales bacterium] diamond 312 54.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
31201939 31201939 PRJEB39269_P_NODE_60015_length_178_cov_1.525180_g59610_i0 PRJEB39269 60015 178 1.52518 2.7148204 Polyangiaceae bacterium 2268199 Bacteria Bacteria 73.9 1.58e-13   NR HLK39604.1 2268199 g59610 i0 64.3 1.90449438202247 56 20 94.4 0 178 11 6 61 HLK39604.1 MupA/Atu3671 family FMN-dependent luciferase-like monooxygenase [Polyangiaceae bacterium] diamond 339 73.9 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
31265644 31265644 PRJEB39269_P_NODE_41455_length_213_cov_2.252874_g41050_i0 PRJEB39269 41455 213 2.252874 4.79862162 Myxococcales bacterium 2026763 Bacteria Bacteria 70.5 2.22e-13   NR HKC58682.1 2026763 g41050 i0 50 0.985915492957746 70 35 98.6 0 211 2 20 89 HKC58682.1 hypothetical protein [Myxococcales bacterium] diamond 210 70.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
31328876 31328876 PRJEB39269_P_NODE_52496_length_190_cov_0.894040_g52091_i0 PRJEB39269 52496 190 0.89404 1.698676 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 42 0.0351   NR MBA2320376.1 2026735 g52091 i0 51.4 0.58421052631579 37 17 56.8 1 49 156 205 241 MBA2320376.1 IMP dehydrogenase [Deltaproteobacteria bacterium] diamond 111 42 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31708438 31708438 PRJEB39269_P_NODE_90837_length_150_cov_2.270270_g90432_i0 PRJEB39269 90837 150 2.27027 3.405405 Myxococcaceae bacterium 2484252 Bacteria Bacteria 44.3 0.00307   NR MDB5212839.1 2484252 g90432 i0 87.5 0.48 24 3 48 0 79 150 21 44 MDB5212839.1 Serine/threonine kinase [Myxococcaceae bacterium] diamond 72 44.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
31828201 31828201 PRJEB39269_P_NODE_80457_length_158_cov_3.151261_g80052_i0 PRJEB39269 80457 158 3.151261 4.97899238 Bacteria 2 Bacteria Bacteria 46.2 6.98e-4   NR MEA2750603.1 2026763 g80052 i0 88 0.949367088607595 25 3 47.5 0 76 2 502 526 MEA2750603.1 uncharacterized protein [Myxococcales bacterium] diamond 150 46.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32088084 32088084 PRJEB39269_P_NODE_66638_length_170_cov_3.267176_g66233_i0 PRJEB39269 66638 170 3.267176 5.5541992 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 49.7 4.8e-5   NR MBI2605272.1 2026735 g66233 i0 80.8 0.917647058823529 26 5 45.9 0 79 2 21 46 MBI2605272.1 tetratricopeptide repeat protein [Deltaproteobacteria bacterium] diamond 156 49.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;