contig_metadata
12 rows where analysis = "diamond", bioproject = "PRJEB39269" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1331385 | 1331385 | PRJEB39269_P_NODE_77382_length_160_cov_3.239669_g76977_i0 | PRJEB39269 | 77382 | 160 | 3.239669 | 5.1834704 | uncultured Subdoligranulum sp. | 512298 | Bacteria | Bacteria | 58.9 | 2.23e-8 | NR | WP_295473178.1 | 512298 | g76977 | i0 | 100 | 0.4875 | 26 | 0 | 48.8 | 0 | 80 | 3 | 291 | 316 | WP_295473178.1 glycosyltransferase family 4 protein [uncultured Subdoligranulum sp.] | diamond | 78 | 58.9 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Subdoligranulum | uncultured Subdoligranulum sp. | ||
| 27728732 | 27728732 | PRJEB39269_P_NODE_81784_length_157_cov_2.898305_g81379_i0 | PRJEB39269 | 81784 | 157 | 2.898305 | 4.55033885 | Liquorilactobacillus nagelii | 82688 | Bacteria | Bacteria | 47 | 2.24e-5 | NR | WP_415609888.1 | 82688 | g81379 | i0 | 61.4 | 1.68152866242038 | 44 | 16 | 84.1 | 1 | 9 | 140 | 6 | 48 | WP_415609888.1 Ltp family lipoprotein, partial [Liquorilactobacillus nagelii] | diamond | 264 | 47 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Liquorilactobacillus | Liquorilactobacillus nagelii | ||
| 28006163 | 28006163 | PRJEB39269_P_NODE_80325_length_158_cov_3.873950_g79920_i0 | PRJEB39269 | 80325 | 158 | 3.87395 | 6.120841 | Bacillaceae | 186817 | Bacteria | Bacteria | 44.7 | 0.00241 | NR | WP_173058779.1 | 2738405 | g79920 | i0 | 65.5 | 2.63924050632911 | 29 | 10 | 55.1 | 0 | 156 | 70 | 278 | 306 | WP_173058779.1 DHH family phosphoesterase [Neobacillus endophyticus] | diamond | 417 | 44.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Neobacillus | Neobacillus endophyticus | ||
| 28321629 | 28321629 | PRJEB39269_P_NODE_59246_length_179_cov_1.750000_g58841_i0 | PRJEB39269 | 59246 | 179 | 1.75 | 3.1325 | Bacteria | 2 | Bacteria | Bacteria | 96.7 | 1.32e-21 | NR | WP_036720653.1 | 1236974 | g58841 | i0 | 69.5 | 15.6033519553073 | 59 | 18 | 98.9 | 0 | 177 | 1 | 21 | 79 | WP_036720653.1 amino acid adenylation domain-containing protein, partial [Paenibacillus sp. JCM 10914] | diamond | 2793 | 96.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus sp. JCM 10914 | ||
| 28328116 | 28328116 | PRJEB39269_P_NODE_10466_length_431_cov_2.701531_g10061_i0 | PRJEB39269 | 10466 | 431 | 2.701531 | 11.64359861 | Lachnospiraceae bacterium | 1898203 | Bacteria | Bacteria | 43.9 | 0.0292 | NR | MCR5720393.1 | 1898203 | g10061 | i0 | 42.9 | 0.292343387470998 | 42 | 22 | 29.2 | 1 | 55 | 180 | 60 | 99 | MCR5720393.1 hypothetical protein [Lachnospiraceae bacterium] | diamond | 126 | 43.9 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnospiraceae bacterium | |||
| 29142871 | 29142871 | PRJEB39269_P_NODE_91609_length_150_cov_1.234234_g91204_i0 | PRJEB39269 | 91609 | 150 | 1.234234 | 1.851351 | Bacteria | 2 | Bacteria | Bacteria | 95.5 | 7.14e-24 | NR | WP_158084704.1 | 1313 | g91204 | i0 | 100 | 2.94 | 49 | 0 | 98 | 0 | 2 | 148 | 27 | 75 | WP_158084704.1 hypothetical protein, partial [Streptococcus pneumoniae] | diamond | 441 | 95.5 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus pneumoniae | ||
| 29426579 | 29426579 | PRJEB39269_P_NODE_35669_length_231_cov_1.494792_g35264_i0 | PRJEB39269 | 35669 | 231 | 1.494792 | 3.45296952 | Bacteria | 2 | Bacteria | Bacteria | 100 | 8.65e-23 | NR | MBU4439869.1 | 1879010 | g35264 | i0 | 73.4 | 2.49350649350649 | 64 | 17 | 83.1 | 0 | 229 | 38 | 11 | 74 | MBU4439869.1 DUF1801 domain-containing protein [Bacillota bacterium] | diamond | 576 | 100 | 1 | Bacteria | Bacillati | Bacillota | Bacillota bacterium | ||||||
| 29938675 | 29938675 | PRJEB39269_P_NODE_25871_length_274_cov_2.940426_g25466_i0 | PRJEB39269 | 25871 | 274 | 2.940426 | 8.05676724 | Lachnospiraceae bacterium | 1898203 | Bacteria | Bacteria | 43.5 | 0.0104 | NR | MCR5720393.1 | 1898203 | g25466 | i0 | 40.5 | 0.45985401459854 | 42 | 23 | 46 | 1 | 147 | 272 | 60 | 99 | MCR5720393.1 hypothetical protein [Lachnospiraceae bacterium] | diamond | 126 | 43.5 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnospiraceae bacterium | |||
| 30475805 | 30475805 | PRJEB39269_P_NODE_66513_length_170_cov_3.442748_g66108_i0 | PRJEB39269 | 66513 | 170 | 3.442748 | 5.8526716 | Weissella cibaria | 137591 | Bacteria | Bacteria | 47.8 | 6.09e-5 | NR | NKO01094.1 | 137591 | g66108 | i0 | 83.3 | 0.423529411764706 | 24 | 4 | 42.4 | 0 | 169 | 98 | 82 | 105 | NKO01094.1 hypothetical protein [Weissella cibaria] | diamond | 72 | 47.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Weissella | Weissella cibaria | ||
| 31012793 | 31012793 | PRJEB39269_P_NODE_67115_length_170_cov_2.748092_g66710_i0 | PRJEB39269 | 67115 | 170 | 2.748092 | 4.6717564 | Clostridioides difficile | 1496 | Bacteria | Bacteria | 57.8 | 3.9e-9 | NR | WP_198102384.1 | 1496 | g66710 | i0 | 100 | 0.917647058823529 | 26 | 0 | 45.9 | 0 | 3 | 80 | 65 | 90 | WP_198102384.1 membrane protein insertase YidC, partial [Clostridioides difficile] | diamond | 156 | 57.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Clostridioides | Clostridioides difficile | ||
| 31195425 | 31195425 | PRJEB39269_P_NODE_89975_length_151_cov_1.464286_g89570_i0 | PRJEB39269 | 89975 | 151 | 1.464286 | 2.21107186 | root | 1 | Root_unresolved | Root_unresolved | 98.6 | 2e-25 | NR | MDN8996941.1 | 1280 | g89570 | i0 | 96 | 4.96688741721854 | 50 | 2 | 99.3 | 0 | 2 | 151 | 8 | 57 | MDN8996941.1 NADH-quinone oxidoreductase subunit H [Staphylococcus aureus] | diamond | 750 | 98.6 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 32814576 | 32814576 | PRJEB39269_P_NODE_78540_length_159_cov_4.566667_g78135_i0 | PRJEB39269 | 78540 | 159 | 4.566667 | 7.26100053 | Enterococcus hermanniensis | 249189 | Bacteria | Bacteria | 57 | 4.6e-8 | NR | WP_071856666.1 | 249189 | g78135 | i0 | 96.3 | 0.509433962264151 | 27 | 1 | 50.9 | 0 | 1 | 81 | 38 | 64 | WP_071856666.1 alkaline shock response membrane anchor protein AmaP [Enterococcus hermanniensis] | diamond | 81 | 57 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus hermanniensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;