RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB39269" and tax_kingdom = "Thermotogati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJEB39269 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27949410 27949410 PRJEB39269_P_NODE_91205_length_150_cov_1.477477_g90800_i0 PRJEB39269 91205 150 1.477477 2.2162155 Deinococcus terrestris 2651870 Bacteria Bacteria 60.8 2.59e-9   NR WP_152871818.1 2651870 g90800 i0 57.4 1.92 47 20 94 0 9 149 205 251 WP_152871818.1 ABC transporter substrate-binding protein [Deinococcus terrestris] diamond 288 60.8 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus terrestris
29275335 29275335 PRJEB39269_P_NODE_69549_length_168_cov_4.635659_g69144_i0 PRJEB39269 69549 168 4.635659 7.78790712 Trueperaceae bacterium 2026798 Bacteria Bacteria 55.8 3.12e-7   NR MEX2541964.1 2026798 g69144 i0 88.5 1.85714285714286 26 3 46.4 0 2 79 195 220 MEX2541964.1 extracellular solute-binding protein [Trueperaceae bacterium] diamond 312 55.8 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;