contig_metadata
12 rows where analysis = "diamond", bioproject = "PRJEB39269" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3883167 | 3883167 | PRJEB39269_P_NODE_12124_length_402_cov_1.206612_g11719_i0 | PRJEB39269 | 12124 | 402 | 1.206612 | 4.85058024 | Bacteria | 2 | Bacteria | Bacteria | 154 | 6.26e-44 | NR | HEX9785044.1 | 2006848 | g11719 | i0 | 73.2 | 2.8955223880597 | 97 | 25 | 72.4 | 1 | 401 | 111 | 169 | 264 | HEX9785044.1 DUF1080 domain-containing protein [Opitutaceae bacterium] | diamond | 1164 | 154 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 13742738 | 13742738 | PRJEB39269_P_NODE_80271_length_158_cov_4.495798_g79866_i0 | PRJEB39269 | 80271 | 158 | 4.495798 | 7.10336084 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 55.1 | 1.71e-8 | NR | MFM2096802.1 | 2026780 | g79866 | i0 | 92.6 | 2.6962025316455702 | 27 | 2 | 51.3 | 0 | 82 | 2 | 6 | 32 | MFM2096802.1 Dihydrofolate reductase type 3 [Planctomycetota bacterium] | diamond | 426 | 55.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 26748016 | 26748016 | PRJEB39269_P_NODE_41141_length_214_cov_1.657143_g40736_i0 | PRJEB39269 | 41141 | 214 | 1.657143 | 3.54628602 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 94.7 | 1.28e-20 | NR | HET9374130.1 | 2201154 | g40736 | i0 | 58 | 0.967289719626168 | 69 | 29 | 96.7 | 0 | 208 | 2 | 155 | 223 | HET9374130.1 two-component regulator propeller domain-containing protein [Chthoniobacterales bacterium] | diamond | 207 | 94.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 27570440 | 27570440 | PRJEB39269_P_NODE_87124_length_153_cov_1.649123_g86719_i0 | PRJEB39269 | 87124 | 153 | 1.649123 | 2.52315819 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 43.1 | 0.00794 | NR | HEX9783952.1 | 2006848 | g86719 | i0 | 48.9 | 0.882352941176471 | 45 | 23 | 88.2 | 0 | 8 | 142 | 704 | 748 | HEX9783952.1 TonB-dependent receptor [Opitutaceae bacterium] | diamond | 135 | 43.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 27697146 | 27697146 | PRJEB39269_P_NODE_88684_length_152_cov_1.442478_g88279_i0 | PRJEB39269 | 88684 | 152 | 1.442478 | 2.19256656 | Tepidisphaeraceae bacterium | 2876886 | Bacteria | Bacteria | 66.2 | 5.43e-11 | NR | HSZ58344.1 | 2876886 | g88279 | i0 | 70.2 | 7.36184210526316 | 47 | 14 | 92.8 | 0 | 10 | 150 | 18 | 64 | HSZ58344.1 long-chain fatty acid--CoA ligase [Tepidisphaeraceae bacterium] | diamond | 1119 | 66.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Tepidisphaeraceae bacterium | ||
| 27823261 | 27823261 | PRJEB39269_P_NODE_66784_length_170_cov_3.083969_g66379_i0 | PRJEB39269 | 66784 | 170 | 3.083969 | 5.2427473000000004 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 50.4 | 1.44e-5 | NR | MBX3406412.1 | 2026777 | g66379 | i0 | 84.6 | 0.9 | 26 | 4 | 45.9 | 0 | 1 | 78 | 21 | 46 | MBX3406412.1 sigma-70 family RNA polymerase sigma factor [Phycisphaeraceae bacterium] | diamond | 153 | 50.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 27879651 | 27879651 | PRJEB39269_P_NODE_49165_length_196_cov_1.044586_g48760_i0 | PRJEB39269 | 49165 | 196 | 1.044586 | 2.04738856 | Bacteria | 2 | Bacteria | Bacteria | 122 | 2.9499999999999997e-32 | NR | MBV8413705.1 | 2026799 | g48760 | i0 | 84.6 | 3.97959183673469 | 65 | 10 | 99.5 | 0 | 1 | 195 | 169 | 233 | MBV8413705.1 5-deoxy-glucuronate isomerase [Verrucomicrobiota bacterium] | diamond | 780 | 122 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 28549479 | 28549479 | PRJEB39269_P_NODE_82147_length_157_cov_1.525424_g81742_i0 | PRJEB39269 | 82147 | 157 | 1.525424 | 2.39491568 | Candidatus Udaeobacter sp. | 2665650 | Bacteria | Bacteria | 86.3 | 5.35e-18 | NR | HEV3098604.1 | 2665650 | g81742 | i0 | 80.4 | 0.974522292993631 | 51 | 10 | 97.5 | 0 | 1 | 153 | 777 | 827 | HEV3098604.1 CusA/CzcA family heavy metal efflux RND transporter [Candidatus Udaeobacter sp.] | diamond | 153 | 86.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Candidatus Udaeobacter | Candidatus Udaeobacter sp. | |
| 28959957 | 28959957 | PRJEB39269_P_NODE_34248_length_236_cov_1.441624_g33843_i0 | PRJEB39269 | 34248 | 236 | 1.441624 | 3.40223264 | Pirellulaceae bacterium | 2699754 | Bacteria | Bacteria | 45.1 | 0.00522 | NR | MBX3417541.1 | 2699754 | g33843 | i0 | 40.4 | 0.597457627118644 | 47 | 28 | 59.7 | 0 | 23 | 163 | 22 | 68 | MBX3417541.1 AMP-binding protein [Pirellulaceae bacterium] | diamond | 141 | 45.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Pirellulaceae bacterium | ||
| 29117794 | 29117794 | PRJEB39269_P_NODE_52589_length_189_cov_3.213333_g52184_i0 | PRJEB39269 | 52589 | 189 | 3.213333 | 6.07319937 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 41.6 | 0.0478 | NR | HET6202587.1 | 2026780 | g52184 | i0 | 37.9 | 0.920634920634921 | 58 | 32 | 85.7 | 1 | 10 | 171 | 48 | 105 | HET6202587.1 glycosyltransferase [Planctomycetota bacterium] | diamond | 174 | 41.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 29622334 | 29622334 | PRJEB39269_P_NODE_68710_length_169_cov_2.784615_g68305_i0 | PRJEB39269 | 68710 | 169 | 2.784615 | 4.70599935 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 80.1 | 8.94e-16 | NR | MBI5691970.1 | 2026799 | g68305 | i0 | 74.1 | 1.02958579881657 | 58 | 12 | 97.6 | 1 | 3 | 167 | 15 | 72 | MBI5691970.1 NADP-dependent isocitrate dehydrogenase [Verrucomicrobiota bacterium] | diamond | 174 | 80.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31771683 | 31771683 | PRJEB39269_P_NODE_87137_length_153_cov_1.596491_g86732_i0 | PRJEB39269 | 87137 | 153 | 1.596491 | 2.44263123 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 51.2 | 1.14e-5 | NR | MEO2089549.1 | 2052164 | g86732 | i0 | 56.1 | 0.803921568627451 | 41 | 18 | 80.4 | 0 | 1 | 123 | 230 | 270 | MEO2089549.1 hypothetical protein [Gemmataceae bacterium] | diamond | 123 | 51.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;