RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJEB36940" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 6 ✖

bioproject 1

  • PRJEB36940 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27121266 27121266 PRJEB36940_P_NODE_12522_length_252_cov_0.865922_g12393_i0 PRJEB36940 12522 252 0.865922 2.18212344 Tupanvirus 2094720 Viruses Viruses 81.3 5.18e-16   NR YP_010781083.1 2126984 g12393 i0 50.7 1.78571428571429 75 36 89.3 1 251 27 133 206 YP_010781083.1 hypothetical protein QJ856_gp0282 [Tupanvirus deep ocean] diamond 450 81.6 0.996323529411765 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Tupanvirus Tupanvirus altamarinense
27917650 27917650 PRJEB36940_P_NODE_15185_length_244_cov_0.906433_g15056_i0 PRJEB36940 15185 244 0.906433 2.21169652 Caudoviricetes sp. 2832643 Viruses Viruses 41.6 0.0133   NR DAO61698.1 2832643 g15056 i0 70.8 0.295081967213115 24 7 29.5 0 168 239 6 29 DAO61698.1 MAG TPA: hypothetical protein [Caudoviricetes sp.] diamond 72 41.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
29717201 29717201 PRJEB36940_P_NODE_15490_length_243_cov_0.917647_g15361_i0 PRJEB36940 15490 243 0.917647 2.22988221 Caudoviricetes sp. 2832643 Viruses Viruses 105 4.53e-25   NR XOS08245.1 2832643 g15361 i0 67.1 0.975308641975309 79 26 97.5 0 241 5 199 277 XOS08245.1 MAG: hypothetical protein MSP0190_85 [Caudoviricetes sp.] diamond 237 105 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
29875461 29875461 PRJEB36940_P_NODE_9711_length_280_cov_1.502415_g9582_i0 PRJEB36940 9711 280 1.502415 4.206762 Leviviridae sp. 2027243 Viruses Viruses 67.8 7.54e-11   NR DAH09204.1 2027243 g9582 i0 38.7 0.996428571428571 93 54 99.6 1 2 280 165 254 DAH09204.1 MAG TPA: capsid protein [Leviviridae sp.] diamond 279 67.8 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae   Leviviridae sp.
30570170 30570170 PRJEB36940_P_NODE_5273_length_372_cov_1.505017_g5144_i0 PRJEB36940 5273 372 1.505017 5.59866324 Micromonas commoda virus 2 3057169 Viruses Viruses 49.3 4.48e-4   NR XKM46422.1 3378357 g5144 i0 54.1 0.935483870967742 37 17 29.8 0 13 123 89 125 XKM46422.1 hypothetical protein McV20-T_00003 [Micromonas commoda virus 20T] diamond 348 49.3 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Prasinovirus Micromonas commoda virus 20T
31550524 31550524 PRJEB36940_P_NODE_14216_length_247_cov_0.890805_g14087_i0 PRJEB36940 14216 247 0.890805 2.20028835 Tupanvirus soda lake 2126985 Viruses Viruses 82 5.47e-16   NR YP_010782467.1 2126985 g14087 i0 65 0.728744939271255 60 20 72.9 1 2 181 429 487 YP_010782467.1 hypothetical protein QJ857_gp0240 [Tupanvirus soda lake] diamond 180 82 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Tupanvirus Tupanvirus salinum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;