RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB36940" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB36940 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27697112 27697112 PRJEB36940_P_NODE_14364_length_246_cov_1.167630_g14235_i0 PRJEB36940 14364 246 1.16763 2.8723698 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 47.8 1.91e-4   NR MBI4559964.1 2030809 g14235 i0 62.9 0.426829268292683 35 13 42.7 0 7 111 67 101 MBI4559964.1 ankyrin repeat domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 105 47.8 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
32688506 32688506 PRJEB36940_P_NODE_10780_length_268_cov_1.235897_g10651_i0 PRJEB36940 10780 268 1.235897 3.31220396 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 70.9 6.22e-12   NR MFO7774597.1 2030809 g10651 i0 54.1 0.682835820895522 61 27 68.3 1 9 191 357 416 MFO7774597.1 polysaccharide lyase family 8 super-sandwich domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 183 70.9 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;