RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJEB36940" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 8 ✖

bioproject 1

  • PRJEB36940 · 8 ✖

analysis 1

  • diamond · 8 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10259475 10259475 PRJEB36940_P_NODE_13489_length_249_cov_0.880682_g13360_i0 PRJEB36940 13489 249 0.880682 2.19289818 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 105 2.7e-26   NR XP_013754744.1 461836 g13360 i0 56.6 17.0722891566265 83 36 100 0 249 1 46 128 XP_013754744.1 GTP-binding protein SAS1 [Thecamonas trahens ATCC 50062] diamond 4251 105 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
12810353 12810353 PRJEB36940_P_NODE_5931_length_352_cov_3.121864_g5802_i0 PRJEB36940 5931 352 3.121864 10.98896128 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 130 3.86e-34   NR XP_013760592.1 461836 g5802 i0 66.3 0.886363636363636 104 33 86.9 1 307 2 31 134 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 312 130 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
15358935 15358935 PRJEB36940_P_NODE_3913_length_431_cov_6.287709_g3784_i0 PRJEB36940 3913 431 6.287709 27.10002579 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 167 1.0499999999999999e-47   NR XP_013760592.1 461836 g3784 i0 66.4 1.79582366589327 137 44 94 1 27 431 31 167 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 774 167 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29401743 29401743 PRJEB36940_P_NODE_2709_length_514_cov_4.467120_g2582_i0 PRJEB36940 2709 514 4.46712 22.9609968 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 226 1.4800000000000002e-70   NR XP_013760592.1 461836 g2582 i0 67.4 1.00389105058366 172 48 99.8 3 2 514 153 317 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 516 226 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29622305 29622305 PRJEB36940_P_NODE_12930_length_250_cov_1.559322_g12801_i0 PRJEB36940 12930 250 1.559322 3.898305 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 59.7 4.21e-8   NR XP_013755386.1 461836 g12801 i0 38.5 0.936 78 47 93.6 1 241 8 252 328 XP_013755386.1 uncharacterized protein AMSG_08305 [Thecamonas trahens ATCC 50062] diamond 234 59.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30696709 30696709 PRJEB36940_P_NODE_10694_length_269_cov_1.198980_g10565_i0 PRJEB36940 10694 269 1.19898 3.2252562 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 71.2 4.62e-12   NR XP_013759207.1 461836 g10565 i0 66 0.524163568773234 47 16 52.4 0 269 129 454 500 XP_013759207.1 glucoamylase [Thecamonas trahens ATCC 50062] diamond 141 71.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32562944 32562944 PRJEB36940_P_NODE_9439_length_284_cov_1.090047_g9310_i0 PRJEB36940 9439 284 1.090047 3.09573348 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 92 4.51e-21   NR XP_013762030.1 461836 g9310 i0 52.9 0.897887323943662 85 40 89.8 0 28 282 54 138 XP_013762030.1 succinate dehydrogenase cytochrome b subunit [Thecamonas trahens ATCC 50062] diamond 255 92 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32751602 32751602 PRJEB36940_P_NODE_14300_length_246_cov_2.075145_g14171_i0 PRJEB36940 14300 246 2.075145 5.1048567 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 64.7 2.05e-10   NR XP_013752724.1 461836 g14171 i0 42.3 0.865853658536585 71 41 86.6 0 214 2 9 79 XP_013752724.1 dual specificity protein phosphatase [Thecamonas trahens ATCC 50062] diamond 213 64.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;