RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJEB3181" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB3181 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26653144 26653144 PRJEB3181_S_NODE_8981_length_211_cov_2.471591_g8688_i0 PRJEB3181 8981 211 2.471591 5.21505701 Planctomycetota bacterium 2026780 Bacteria Bacteria 57.8 3.89e-8   NR MEO0652114.1 2026780 g8688 i0 67.6 2.67298578199052 37 12 52.6 0 204 94 143 179 MEO0652114.1 hypothetical protein [Planctomycetota bacterium] diamond 564 57.8 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
27343073 27343073 PRJEB3181_S_NODE_12403_length_183_cov_1.547297_g12110_i0 PRJEB3181 12403 183 1.547297 2.83155351 Pseudomonadati 3379134 Bacteria Bacteria 81.6 8.35e-18   NR MBB03197.1 37635 g12110 i0 64.4 7.73770491803279 59 21 96.7 0 181 5 89 147 MBB03197.1 hypothetical protein [Planctomyces sp.] diamond 1416 82 0.995121951219512 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae Planctomyces Planctomyces sp.
28012664 28012664 PRJEB3181_S_NODE_8505_length_216_cov_2.685083_g8212_i0 PRJEB3181 8505 216 2.685083 5.79977928 Planctomycetaceae bacterium 2026779 Bacteria Bacteria 75.9 1.89e-15   NR MEO1997232.1 2026779 g8212 i0 51.5 1.83333333333333 66 32 91.7 0 215 18 72 137 MEO1997232.1 DoxX family protein [Planctomycetaceae bacterium] diamond 396 75.9 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
28669127 28669127 PRJEB3181_S_NODE_18087_length_153_cov_1.355932_g17794_i0 PRJEB3181 18087 153 1.355932 2.07457596 Bacteria 2 Bacteria Bacteria 43.9 0.00347   NR RKY12820.1 2026780 g17794 i0 54.5 1.29411764705882 33 15 64.7 0 3 101 174 206 RKY12820.1 MAG: HslU--HslV peptidase ATPase subunit, partial [Planctomycetota bacterium] diamond 198 43.9 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;