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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJEB3181" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB3181 · 12 ✖

analysis 1

  • diamond · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
56031 56031 PRJEB3181_P_NODE_4561_length_373_cov_6.561404_g4313_i0 PRJEB3181 4561 373 6.561404 24.47403692 Metazoa 33208 Nematoda Nematoda 68.2 1.36e-10   NR KAL3073343.1 157864 g4313 i0 77.1 1.70509383378016 48 11 38.6 0 367 224 238 285 KAL3073343.1 hypothetical protein niasHT_038700 [Heterodera trifolii] diamond 636 68.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera trifolii
3539399 3539399 PRJEB3181_S_NODE_13783_length_174_cov_1.438849_g13490_i0 PRJEB3181 13783 174 1.438849 2.50359726 Soboliphyme baturini 241478 Nematoda Nematoda 81.3 2.66e-17   NR VDP14147.1 241478 g13490 i0 67.9 0.96551724137931 56 18 96.6 0 170 3 128 183 VDP14147.1 unnamed protein product [Soboliphyme baturini] diamond 168 81.3 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Dioctophymatida Soboliphymatidae Soboliphyme Soboliphyme baturini
23007943 23007943 PRJEB3181_P_NODE_13199_length_233_cov_1.816832_g12935_i0 PRJEB3181 13199 233 1.816832 4.23321856 Rhabditoides inermis 96661 Nematoda Nematoda 82.4 3.26e-18   NR ACV21053.1 96661 g12935 i0 72.9 3.03862660944206 59 16 76 0 233 57 57 115 ACV21053.1 large subunit ribosomal protein 35, partial [Rhabditoides inermis] diamond 708 82.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Rhabditoides Rhabditoides inermis
26994851 26994851 PRJEB3181_P_NODE_21782_length_175_cov_1.083333_g21517_i0 PRJEB3181 21782 175 1.083333 1.89583275 Rhabditida 6236 Nematoda Nematoda 54.3 8.97e-7   NR VDP35265.1 6339 g21517 i0 74.2 2.12571428571429 31 8 53.1 0 173 81 200 230 VDP35265.1 unnamed protein product [Heligmosomoides polygyrus] diamond 372 54.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heligmosomidae Heligmosomoides Heligmosomoides polygyrus
27121261 27121261 PRJEB3181_P_NODE_12482_length_240_cov_1.741627_g12218_i0 PRJEB3181 12482 240 1.741627 4.1799048 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 44.3 0.0103   NR KAI6181668.1 269767 g12218 i0 31.3 6.275 67 46 83.8 0 240 40 366 432 KAI6181668.1 hypothetical protein M3Y98_00853700 [Aphelenchoides besseyi] diamond 1506 44.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides besseyi
27248023 27248023 PRJEB3181_P_NODE_17423_length_199_cov_2.154762_g17159_i0 PRJEB3181 17423 199 2.154762 4.28797638 Aphelenchoides 90723 Nematoda Nematoda 88.2 9.74e-20   NR KAI6211714.1 269767 g17159 i0 71.4 7.59798994974874 56 16 84.4 0 199 32 138 193 KAI6211714.1 50S ribosomal protein L5 [Aphelenchoides besseyi] diamond 1512 88.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides besseyi
27791570 27791570 PRJEB3181_S_NODE_15424_length_165_cov_3.584615_g15131_i0 PRJEB3181 15424 165 3.584615 5.91461475 Pristionchus fissidentatus 1538716 Nematoda Nematoda 63.2 3.28e-11   NR GMT14341.1 1538716 g15131 i0 65.2 0.836363636363636 46 16 83.6 0 155 18 53 98 GMT14341.1 hypothetical protein PFISCL1PPCAC_5638, partial [Pristionchus fissidentatus] diamond 138 63.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus
28075497 28075497 PRJEB3181_P_NODE_9405_length_277_cov_4.402439_g9141_i0 PRJEB3181 9405 277 4.402439 12.19475603 Pristionchus fissidentatus 1538716 Nematoda Nematoda 92 5.83e-22   NR GMT14341.1 1538716 g9141 i0 64.3 2.25270758122744 70 24 75.8 1 272 63 30 98 GMT14341.1 hypothetical protein PFISCL1PPCAC_5638, partial [Pristionchus fissidentatus] diamond 624 92 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus
30943163 30943163 PRJEB3181_P_NODE_12854_length_236_cov_3.785366_g12590_i0 PRJEB3181 12854 236 3.785366 8.93346376 Metazoa 33208 Nematoda Nematoda 45.1 0.00403   NR CAD5222652.1 6326 g12590 i0 51.4 4.24576271186441 70 27 89 4 234 25 50 112 CAD5222652.1 unnamed protein product [Bursaphelenchus xylophilus] diamond 1002 45.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
31170500 31170500 PRJEB3181_P_NODE_12955_length_235_cov_3.906863_g12691_i0 PRJEB3181 12955 235 3.906863 9.18112805 Mesorhabditis spiculigera 96644 Nematoda Nematoda 88.2 2.76e-18   NR CAJ0582755.1 96644 g12691 i0 60.6 0.842553191489362 66 25 84.3 1 235 38 388 452 CAJ0582755.1 unnamed protein product, partial [Mesorhabditis spiculigera] diamond 198 88.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis spiculigera
31986424 31986424 PRJEB3181_P_NODE_18578_length_192_cov_1.478261_g18314_i0 PRJEB3181 18578 192 1.478261 2.83826112 Metazoa 33208 Nematoda Nematoda 80.5 7.66e-17   NR MCP9260525.1 6287 g18314 i0 76.9 44.796875 52 12 81.3 0 190 35 90 141 MCP9260525.1 Histone H2B [Dirofilaria immitis] diamond 8601 81.3 0.990159901599016 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Dirofilaria Dirofilaria immitis
32594295 32594295 PRJEB3181_P_NODE_20920_length_179_cov_1.398649_g20656_i0 PRJEB3181 20920 179 1.398649 2.50358171 Trichinella murrelli 144512 Nematoda Nematoda 85.1 2.51e-18   NR KRX40024.1 144512 g20656 i0 69.4 3.25139664804469 49 15 82.1 0 1 147 198 246 KRX40024.1 60S ribosomal protein L7 [Trichinella murrelli] diamond 582 85.1 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella murrelli

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;