RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJEB3181" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 5 ✖

tax_clade 1

bioproject 1

  • PRJEB3181 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27633694 27633694 PRJEB3181_P_NODE_4424_length_376_cov_25.994203_g4176_i0 PRJEB3181 4424 376 25.994203 97.73820328 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 83.2 1.2e-17   NR MES1912234.1 1215613 g4176 i0 54.7 1.70744680851064 75 31 59.8 2 346 122 49 120 MES1912234.1 hypothetical protein [Cercozoa sp. M6MM] diamond 642 83.2 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
27917629 27917629 PRJEB3181_P_NODE_5005_length_360_cov_34.796353_g4756_i0 PRJEB3181 5005 360 34.796353 125.2668708 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 83.6 7.17e-18   NR MES1912234.1 1215613 g4756 i0 54.7 1.25 75 31 62.5 2 330 106 49 120 MES1912234.1 hypothetical protein [Cercozoa sp. M6MM] diamond 450 83.6 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
30981375 30981375 PRJEB3181_P_NODE_9974_length_269_cov_3.151261_g9710_i0 PRJEB3181 9974 269 3.151261 8.47689209 Lotharella oceanica 641309 SAR_Eukaryotes SAR_Eukaryotes 67.4 8.99e-13   NR AIB09582.1 641309 g9710 i0 57.4 0.602230483271376 54 23 60.2 0 47 208 1 54 AIB09582.1 hypothetical protein M951_chr1100 [Lotharella oceanica] diamond 162 67.4 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Lotharella Lotharella oceanica
31487222 31487222 PRJEB3181_P_NODE_18336_length_193_cov_3.216049_g18072_i0 PRJEB3181 18336 193 3.216049 6.20697457 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 87 5.5600000000000006e-21   NR MES1911722.1 1215613 g18072 i0 73.1 0.808290155440414 52 14 80.8 0 8 163 1 52 MES1911722.1 hypothetical protein [Cercozoa sp. M6MM] diamond 156 87 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
32656791 32656791 PRJEB3181_P_NODE_19000_length_189_cov_4.284810_g18736_i0 PRJEB3181 19000 189 4.28481 8.0982909 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 49.7 6.14e-5   NR MES1907989.1 1215613 g18736 i0 66 0.746031746031746 47 12 74.6 1 172 32 279 321 MES1907989.1 hypothetical protein [Cercozoa sp. M6MM] diamond 141 49.7 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;