RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJEB3181" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJEB3181 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15016712 15016712 PRJEB3181_S_NODE_3372_length_311_cov_1342.471014_g3079_i0 PRJEB3181 3372 311 1342.471014 4175.08485354 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 122 9.999999999999999e-33   NR MBX9724270.1 2364082 g3079 i0 98.3 0.559485530546624 58 1 55.9 0 311 138 113 170 MBX9724270.1 50S ribosomal protein L15e [Candidatus Obscuribacterales bacterium] diamond 174 122 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
29086149 29086149 PRJEB3181_P_NODE_7328_length_310_cov_3.964158_g7067_i0 PRJEB3181 7328 310 3.964158 12.2888898 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 105 3.21e-26   NR MBX9724270.1 2364082 g7067 i0 98.1 0.503225806451613 52 1 50.3 0 1 156 119 170 MBX9724270.1 50S ribosomal protein L15e [Candidatus Obscuribacterales bacterium] diamond 156 105 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
31929792 31929792 PRJEB3181_S_NODE_15817_length_163_cov_2.312500_g15524_i0 PRJEB3181 15817 163 2.3125 3.769375 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 95.5 1.5699999999999994e-23   NR MBX9722668.1 2364082 g15524 i0 81.1 0.975460122699387 53 10 97.5 0 2 160 70 122 MBX9722668.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 159 95.5 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
32625530 32625530 PRJEB3181_P_NODE_21040_length_178_cov_2.714286_g20776_i0 PRJEB3181 21040 178 2.714286 4.83142908 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 58.9 4.12e-9   NR MBX9722668.1 2364082 g20776 i0 78.8 0.556179775280899 33 7 55.6 0 176 78 96 128 MBX9722668.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 99 58.9 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;