RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB3181" and tax_phylum = "Candidatus Curtissiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Curtissiibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB3181 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27381152 27381152 PRJEB3181_S_NODE_11023_length_193_cov_2.025316_g10730_i0 PRJEB3181 11023 193 2.025316 3.90885988 Candidatus Curtissbacteria bacterium 2750075 Bacteria Bacteria 96.7 1.13e-21   NR MBP6980007.1 2750075 g10730 i0 100 0.699481865284974 45 0 69.9 0 193 59 378 422 MBP6980007.1 hypothetical protein [Candidatus Curtissbacteria bacterium] diamond 135 96.7 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium
27570397 27570397 PRJEB3181_S_NODE_9764_length_203_cov_3.232143_g9471_i0 PRJEB3181 9764 203 3.232143 6.56125029 Candidatus Curtissbacteria bacterium 2750075 Bacteria Bacteria 120 1.09e-33   NR MBP6980006.1 2750075 g9471 i0 100 0.931034482758621 63 0 93.1 0 2 190 32 94 MBP6980006.1 nucleotidyltransferase domain-containing protein [Candidatus Curtissbacteria bacterium] diamond 189 120 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium
30949734 30949734 PRJEB3181_S_NODE_4794_length_274_cov_2.640167_g4501_i0 PRJEB3181 4794 274 2.640167 7.23405758 Candidatus Curtissbacteria bacterium 2750075 Bacteria Bacteria 171 2.68e-49   NR MBP6980007.1 2750075 g4501 i0 100 0.996350364963504 91 0 99.6 0 274 2 293 383 MBP6980007.1 hypothetical protein [Candidatus Curtissbacteria bacterium] diamond 273 171 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;