RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB3181" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJEB3181 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27917638 27917638 PRJEB3181_S_NODE_7105_length_234_cov_1.391960_g6812_i0 PRJEB3181 7105 234 1.39196 3.2571864 Dicistroviridae sp. 1955144 Viruses Viruses 55.8 8.41e-7   NR ULF99788.1 1955144 g6812 i0 32.4 5.48717948717949 74 49 93.6 1 234 16 683 756 ULF99788.1 MAG: hypothetical protein, partial [Dicistroviridae sp.] diamond 1284 55.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.
28889900 28889900 PRJEB3181_S_NODE_10228_length_199_cov_2.932927_g9935_i0 PRJEB3181 10228 199 2.932927 5.83652473 Viruses 10239 Viruses Viruses 52.8 6.13e-6   NR WZH59752.1 3130501 g9935 i0 54.9 1.59798994974874 51 23 76.9 0 154 2 221 271 WZH59752.1 MAG: RNA-dependent RNA polymerase [Ripuglab virus] diamond 318 52.8 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae   Ripuglab virus
29054563 29054563 PRJEB3181_S_NODE_7588_length_227_cov_2.057292_g7295_i0 PRJEB3181 7588 227 2.057292 4.67005284 Ripuglab virus 3130501 Viruses Viruses 44.3 0.00867   NR WZH59752.1 3130501 g7295 i0 32.8 1.65198237885463 64 43 84.6 0 210 19 67 130 WZH59752.1 MAG: RNA-dependent RNA polymerase [Ripuglab virus] diamond 375 44.3 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae   Ripuglab virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;