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contig_metadata

32 rows where analysis = "diamond", bioproject = "PRJEB3181" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 32 ✖

bioproject 1

  • PRJEB3181 · 32 ✖

analysis 1

  • diamond · 32 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10258647 10258647 PRJEB3181_P_NODE_11849_length_247_cov_1.106481_g11585_i0 PRJEB3181 11849 247 1.106481 2.73300807 root 1 Root_unresolved Root_unresolved 107 3.35e-25   NR KAF2068738.1 133409 g11585 i0 80 28.1538461538462 65 13 78.9 0 239 45 358 422 KAF2068738.1 hypothetical protein CYY_009942 [Polysphondylium violaceum] diamond 6954 108 0.990740740740741 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
10258900 10258900 PRJEB3181_S_NODE_6369_length_245_cov_1.852381_g6076_i0 PRJEB3181 6369 245 1.852381 4.53833345 Dictyosteliaceae 2058185 Evosea other_Eukaryota 84.7 5.72e-18   NR KAF2072778.1 133409 g6076 i0 87.8 1.01632653061224 41 5 50.2 0 232 110 183 223 KAF2072778.1 hypothetical protein CYY_005900 [Polysphondylium violaceum] diamond 249 85.5 0.990643274853801 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
12809527 12809527 PRJEB3181_P_NODE_4571_length_373_cov_3.248538_g4323_i0 PRJEB3181 4571 373 3.248538 12.11704674 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 117 5.23e-31   NR 7SOG_A 5755 g4323 i0 50.9 1.76943699731903 110 52 86.9 1 371 48 23 132 7SOG_A Chain A, Actophorin [Acanthamoeba castellanii] diamond 660 117 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15358054 15358054 PRJEB3181_P_NODE_14213_length_224_cov_1.341969_g13949_i0 PRJEB3181 14213 224 1.341969 3.00601056 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 103 1.57e-24   NR XP_004334064.1 1257118 g13949 i0 87.5 0.75 56 7 75 0 2 169 250 305 XP_004334064.1 Fibrillarin, putative [Acanthamoeba castellanii str. Neff] diamond 168 103 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23007949 23007949 PRJEB3181_P_NODE_14919_length_218_cov_3.053476_g14655_i0 PRJEB3181 14919 218 3.053476 6.65657768 Entamoeba histolytica HM-1:IMSS 294381 Evosea other_Eukaryota 86.3 3.04e-19   NR XP_656494.1 294381 g14655 i0 71.7 2.18807339449541 53 15 72.9 0 217 59 115 167 XP_656494.1 peptidyl-prolyl cis-trans isomerase, putative [Entamoeba histolytica HM-1:IMSS] diamond 477 86.3 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
24281809 24281809 PRJEB3181_P_NODE_9480_length_276_cov_3.155102_g9216_i0 PRJEB3181 9480 276 3.155102 8.70808152 Dictyostelium purpureum 5786 Evosea other_Eukaryota 82 2.7e-16   NR XP_003287614.1 5786 g9216 i0 66.2 0.706521739130435 65 17 70.7 1 275 81 235 294 XP_003287614.1 calcium-regulated actin-bundling protein [Dictyostelium purpureum] diamond 195 82 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
26780216 26780216 PRJEB3181_P_NODE_28021_length_151_cov_1.100000_g27756_i0 PRJEB3181 28021 151 1.1 1.661 Physarum polycephalum 5791 Evosea other_Eukaryota 58.5 3.13e-9   NR P22271.2 5791 g27756 i0 68.9 4.47019867549669 45 13 89.4 1 149 15 8 51 P22271.2 RecName: Full=Profilin-A [Physarum polycephalum] diamond 675 58.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
27159434 27159434 PRJEB3181_P_NODE_10142_length_267_cov_1.716102_g9878_i0 PRJEB3181 10142 267 1.716102 4.58199234 Dictyostelium purpureum 5786 Evosea other_Eukaryota 51.6 2.82e-5   NR XP_003291381.1 5786 g9878 i0 44.4 2.2247191011236 54 30 60.7 0 265 104 178 231 XP_003291381.1 20S proteasome subunit alpha-3 [Dictyostelium purpureum] diamond 594 51.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
27412784 27412784 PRJEB3181_P_NODE_15943_length_210_cov_1.821229_g15679_i0 PRJEB3181 15943 210 1.821229 3.8245809 Polysphondylium violaceum 133409 Evosea other_Eukaryota 52.8 4.55e-6   NR KAF2072558.1 133409 g15679 i0 56.1 1.14285714285714 41 18 58.6 0 3 125 176 216 KAF2072558.1 hypothetical protein CYY_006133 [Polysphondylium violaceum] diamond 240 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
27475700 27475700 PRJEB3181_P_NODE_21943_length_174_cov_2.307692_g21678_i0 PRJEB3181 21943 174 2.307692 4.01538408 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 55.8 2.71e-7   NR PRP83381.1 1890364 g21678 i0 79.3 2.39655172413793 29 6 50 0 174 88 204 232 PRP83381.1 ribosomal protein S3a, component of cytosolic 80S ribosome and 40S small subunit [Planoprotostelium fungivorum] diamond 417 55.8 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
27722190 27722190 PRJEB3181_P_NODE_20924_length_179_cov_1.290541_g20660_i0 PRJEB3181 20924 179 1.290541 2.31006839 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 46.2 7.4e-4   NR BAA25923.1 44689 g20660 i0 64.3 3.28491620111732 28 10 46.9 0 3 86 186 213 BAA25923.1 proteasome subunit [Dictyostelium discoideum] diamond 588 46.6 0.991416309012876 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
27760201 27760201 PRJEB3181_S_NODE_18344_length_152_cov_1.367521_g18051_i0 PRJEB3181 18344 152 1.367521 2.07863192 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 64.3 2.6e-11   NR KAH3761877.1 1580589 g18051 i0 58 0.986842105263158 50 21 98.7 0 151 2 84 133 KAH3761877.1 multiprotein-bridging factor 1b [Pelomyxa schiedti] diamond 150 64.3 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
28163869 28163869 PRJEB3181_P_NODE_24805_length_162_cov_1.343511_g24540_i0 PRJEB3181 24805 162 1.343511 2.17648782 Dictyosteliaceae 2058185 Evosea other_Eukaryota 68.2 1.2e-11   NR XP_003294367.1 5786 g24540 i0 71.4 3.09259259259259 42 12 77.8 0 3 128 339 380 XP_003294367.1 uncharacterized protein DICPUDRAFT_51465 [Dictyostelium purpureum] diamond 501 68.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
28201711 28201711 PRJEB3181_P_NODE_25486_length_159_cov_3.335938_g25221_i0 PRJEB3181 25486 159 3.335938 5.30414142 Copromyxa protea 931554 Tubulinea other_Eukaryota 67 3.3e-11   NR BAN33737.1 931554 g25221 i0 86.1 5.13207547169811 36 5 67.9 0 159 52 427 462 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 816 67 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
28233218 28233218 PRJEB3181_P_NODE_12886_length_236_cov_1.239024_g12622_i0 PRJEB3181 12886 236 1.239024 2.92409664 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 77 6.72e-16   NR XP_004348720.1 1257118 g12622 i0 52.2 0.877118644067797 69 28 81.4 1 235 44 60 128 XP_004348720.1 actin binding protein [Acanthamoeba castellanii str. Neff] diamond 207 77 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28264886 28264886 PRJEB3181_P_NODE_15446_length_214_cov_1.256831_g15182_i0 PRJEB3181 15446 214 1.256831 2.68961834 Entamoeba histolytica 5759 Evosea other_Eukaryota 100 1.07e-24   NR AAC31935.1 5759 g15182 i0 68.2 0.925233644859813 66 20 92.5 1 15 212 1 65 AAC31935.1 Rho GDP exchange inhibitor, partial [Entamoeba histolytica] diamond 198 100 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
28486092 28486092 PRJEB3181_P_NODE_1087_length_577_cov_3.542125_g949_i0 PRJEB3181 1087 577 3.542125 20.43806125 Entamoeba histolytica HM-1:IMSS 294381 Evosea other_Eukaryota 74.3 8.29e-12   NR XP_655241.1 294381 g949 i0 59.7 0.348353552859619 67 27 34.8 0 478 278 295 361 XP_655241.1 calreticulin, putative [Entamoeba histolytica HM-1:IMSS] diamond 201 74.3 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
28486093 28486093 PRJEB3181_P_NODE_13507_length_230_cov_2.266332_g13243_i0 PRJEB3181 13507 230 2.266332 5.2125636 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 47 9.75e-4   NR XP_004368149.1 1257118 g13243 i0 46.2 0.508695652173913 39 21 50.9 0 176 60 326 364 XP_004368149.1 TBC domain containing protein [Acanthamoeba castellanii str. Neff] diamond 117 47 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28763629 28763629 PRJEB3181_P_NODE_11967_length_245_cov_5.331776_g11703_i0 PRJEB3181 11967 245 5.331776 13.0628512 root 1 Root_unresolved Root_unresolved 100 4.26e-24   NR PRP86688.1 1890364 g11703 i0 68.7 2.46122448979592 67 21 82 0 2 202 140 206 PRP86688.1 hypothetical protein PROFUN_05167 [Planoprotostelium fungivorum] diamond 603 100 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29370212 29370212 PRJEB3181_P_NODE_4769_length_367_cov_3.089286_g4521_i0 PRJEB3181 4769 367 3.089286 11.33767962 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 49.7 5e-4   NR KAH3732971.1 1580589 g4521 i0 42.9 0.457765667574932 56 31 45 1 362 198 30 85 KAH3732971.1 sequestosome 1 [Pelomyxa schiedti] diamond 168 49.7 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
29401715 29401715 PRJEB3181_P_NODE_10049_length_268_cov_2.717300_g9785_i0 PRJEB3181 10049 268 2.7173 7.282364 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 85.5 3.33e-17   NR PRP80056.1 1890364 g9785 i0 53.2 0.884328358208955 79 36 87.3 1 268 35 81 159 PRP80056.1 Adenylyl cyclase-associated protein 1 [Planoprotostelium fungivorum] diamond 237 85.5 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29432990 29432990 PRJEB3181_P_NODE_27690_length_152_cov_1.090909_g27425_i0 PRJEB3181 27690 152 1.090909 1.65818168 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 69.7 1.31e-13   NR KAH3756789.1 1580589 g27425 i0 76 0.986842105263158 50 12 98.7 0 3 152 34 83 KAH3756789.1 ribosomal protein L35 [Pelomyxa schiedti] diamond 150 69.7 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
29717183 29717183 PRJEB3181_P_NODE_24990_length_161_cov_2.607692_g24725_i0 PRJEB3181 24990 161 2.607692 4.19838412 Nebela penardiana 499102 Tubulinea other_Eukaryota 75.5 1.96e-15   NR AFX73073.1 499102 g24725 i0 73.6 0.987577639751553 53 14 98.8 0 1 159 55 107 AFX73073.1 14-3-3 protein, partial [Nebela penardiana] diamond 159 75.5 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Hyalospheniidae Nebela Nebela penardiana
29748749 29748749 PRJEB3181_P_NODE_7611_length_305_cov_4.660584_g7349_i0 PRJEB3181 7611 305 4.660584 14.2147812 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 54.7 4.97e-6   NR PRP84478.1 1890364 g7349 i0 43.8 0.875409836065574 89 45 83.6 3 294 40 787 874 PRP84478.1 hypothetical protein PROFUN_08063 [Planoprotostelium fungivorum] diamond 267 54.7 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29843773 29843773 PRJEB3181_P_NODE_24031_length_165_cov_1.313433_g23766_i0 PRJEB3181 24031 165 1.313433 2.16716445 Heterostelium album PN5 2086695 Evosea other_Eukaryota 75.1 4.94e-14   NR XP_020435106.1 670386 g23766 i0 63 0.981818181818182 54 20 98.2 0 2 163 211 264 XP_020435106.1 myb domain-containing protein [Heterostelium album PN500] diamond 162 75.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
30191159 30191159 PRJEB3181_P_NODE_18732_length_191_cov_1.981250_g18468_i0 PRJEB3181 18732 191 1.98125 3.7841875 Copromyxa protea 931554 Tubulinea other_Eukaryota 84 5.1e-17   NR BAN33737.1 931554 g18468 i0 76.5 0.801047120418848 51 12 80.1 0 189 37 415 465 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 153 84 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
30475755 30475755 PRJEB3181_P_NODE_19553_length_186_cov_3.290323_g19289_i0 PRJEB3181 19553 186 3.290323 6.12000078 Paramoeba perurans 437603 Discosea other_Eukaryota 57.8 8.89e-8   NR WQA41803.1 437603 g19289 i0 93.1 0.467741935483871 29 2 46.8 0 186 100 187 215 WQA41803.1 heat shock 90 [Paramoeba perurans] diamond 87 57.8 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba perurans
30886402 30886402 PRJEB3181_P_NODE_19954_length_184_cov_2.254902_g19690_i0 PRJEB3181 19954 184 2.254902 4.14901968 Hyalosphenia papilio 318532 Tubulinea other_Eukaryota 95.9 2.81e-23   NR AFX73065.1 318532 g19690 i0 82 2.98369565217391 61 11 99.5 0 184 2 14 74 AFX73065.1 14-3-3 protein, partial [Hyalosphenia papilio] diamond 549 95.9 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Hyalospheniidae Hyalosphenia Hyalosphenia papilio
31322222 31322222 PRJEB3181_P_NODE_10055_length_268_cov_1.907173_g9791_i0 PRJEB3181 10055 268 1.907173 5.11122364 root 1 Root_unresolved Root_unresolved 132 6.909999999999999e-37   NR AAB58345.1 5791 g9791 i0 77.6 5.87686567164179 85 18 94 1 268 17 79 163 AAB58345.1 Pprap1 protein, partial [Physarum polycephalum] diamond 1575 133 0.992481203007519 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
32049819 32049819 PRJEB3181_S_NODE_8258_length_219_cov_2.391304_g7965_i0 PRJEB3181 8258 219 2.391304 5.23695576 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 73.2 3.76e-13   NR KAF2072277.1 133409 g7965 i0 74.5 4.95890410958904 51 12 68.5 1 214 65 300 350 KAF2072277.1 hypothetical protein CYY_006409 [Polysphondylium violaceum] diamond 1086 73.6 0.994565217391304 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
32429632 32429632 PRJEB3181_P_NODE_18719_length_191_cov_2.231250_g18455_i0 PRJEB3181 18719 191 2.23125 4.2616875 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 73.2 1.35e-14   NR XP_003291494.1 5786 g18455 i0 65 9.9738219895288 60 18 89.5 1 190 20 77 136 XP_003291494.1 racB, RHO family GTPase, partial [Dictyostelium purpureum] diamond 1905 73.6 0.994565217391304 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
32499623 32499623 PRJEB3181_P_NODE_26139_length_157_cov_1.571429_g25874_i0 PRJEB3181 26139 157 1.571429 2.46714353 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 56.2 1.74e-7   NR KAH3759416.1 1580589 g25874 i0 56.9 1.94904458598726 51 22 97.5 0 155 3 214 264 KAH3759416.1 glycine-rich RNA binding protein [Pelomyxa schiedti] diamond 306 56.2 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;