RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB30004" and tax_superkingdom = "Viruses"

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tax_phylum 2

tax_kingdom 2

tax_superkingdom 1

  • Viruses · 2 ✖

bioproject 1

  • PRJEB30004 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27791545 27791545 PRJEB30004_P_NODE_536004_length_181_cov_15.330986_g520377_i0 PRJEB30004 536004 181 15.330986 27.74908466 Pimephales minnow adintovirus 2609864 Viruses Viruses 58.2 3.33e-8   NR DAC81394.1 2609864 g520377 i0 69.4 0.596685082872928 36 11 59.7 0 110 3 7 42 DAC81394.1 TPA_asm: FtsK [Pimephales minnow adintovirus] diamond 108 58.2 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus
29243880 29243880 PRJEB30004_P_NODE_490229_length_194_cov_2.116129_g474602_i0 PRJEB30004 490229 194 2.116129 4.10529026 Caudoviricetes sp. 2832643 Viruses Viruses 39.3 0.0332   NR DAJ92805.1 2832643 g474602 i0 62.5 0.494845360824742 32 12 49.5 0 33 128 8 39 DAJ92805.1 MAG TPA: hypothetical protein [Caudoviricetes sp.] diamond 96 39.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;