contig_metadata
7 rows where analysis = "diamond", bioproject = "PRJEB29441" and tax_phylum = "Verrucomicrobiota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8641442 | 8641442 | PRJEB29441_P_NODE_27787_length_199_cov_1.360000_g27346_i0 | PRJEB29441 | 27787 | 199 | 1.36 | 2.7064 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 72.8 | 1.5e-13 | NR | MEY3000757.1 | 2026799 | g27346 | i0 | 55.6 | 0.949748743718593 | 63 | 28 | 95 | 0 | 9 | 197 | 98 | 160 | MEY3000757.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 189 | 72.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27500897 | 27500897 | PRJEB29441_P_NODE_40183_length_166_cov_0.871795_g39742_i0 | PRJEB29441 | 40183 | 166 | 0.871795 | 1.4471797 | root | 1 | Root_unresolved | Root_unresolved | 73.2 | 2.12e-13 | NR | MBP8256567.1 | 2006848 | g39742 | i0 | 53 | 14.7831325301205 | 66 | 19 | 97.6 | 2 | 4 | 165 | 146 | 211 | MBP8256567.1 multicopper oxidase domain-containing protein [Opitutaceae bacterium] | diamond | 2454 | 73.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 27665294 | 27665294 | PRJEB29441_P_NODE_41824_length_165_cov_0.879310_g41383_i0 | PRJEB29441 | 41824 | 165 | 0.87931 | 1.4508615 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 43.9 | 0.00483 | NR | MBS0625518.1 | 2026799 | g41383 | i0 | 52.6 | 0.690909090909091 | 38 | 18 | 69.1 | 0 | 159 | 46 | 203 | 240 | MBS0625518.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 114 | 43.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27917584 | 27917584 | PRJEB29441_P_NODE_31365_length_187_cov_1.260870_g30924_i0 | PRJEB29441 | 31365 | 187 | 1.26087 | 2.3578269 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 79.3 | 1.45e-15 | NR | RYD71398.1 | 2026800 | g30924 | i0 | 59 | 0.978609625668449 | 61 | 25 | 97.9 | 0 | 3 | 185 | 247 | 307 | RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium] | diamond | 183 | 79.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 30318182 | 30318182 | PRJEB29441_P_NODE_39012_length_167_cov_0.864407_g38571_i0 | PRJEB29441 | 39012 | 167 | 0.864407 | 1.44355969 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 41.6 | 0.035 | NR | HEX5218075.1 | 2499141 | g38571 | i0 | 44.4 | 0.970059880239521 | 54 | 26 | 91.6 | 3 | 167 | 15 | 956 | 1008 | HEX5218075.1 Ig-like domain-containing protein [Verrucomicrobiia bacterium] | diamond | 162 | 41.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 30879768 | 30879768 | PRJEB29441_P_NODE_44834_length_163_cov_0.894737_g44393_i0 | PRJEB29441 | 44834 | 163 | 0.894737 | 1.45842131 | Bacteria | 2 | Bacteria | Bacteria | 43.9 | 0.00499 | NR | MEI6177523.1 | 2026799 | g44393 | i0 | 51.4 | 1.93251533742331 | 35 | 17 | 64.4 | 0 | 58 | 162 | 273 | 307 | MEI6177523.1 complex I subunit 1 family protein [Verrucomicrobiota bacterium] | diamond | 315 | 43.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32650310 | 32650310 | PRJEB29441_P_NODE_47440_length_161_cov_0.910714_g46999_i0 | PRJEB29441 | 47440 | 161 | 0.910714 | 1.46624954 | Prosthecobacter | 48463 | Bacteria | Bacteria | 75.9 | 2.53e-14 | NR | WP_184343614.1 | 48466 | g46999 | i0 | 60.4 | 2.94409937888199 | 53 | 21 | 98.8 | 0 | 160 | 2 | 37 | 89 | WP_184343614.1 LTA synthase family protein [Prosthecobacter vanneervenii] | diamond | 474 | 76.3 | 0.99475753604194 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;