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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJEB29441" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 12 ✖

bioproject 1

  • PRJEB29441 · 12 ✖

analysis 1

  • diamond · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26780164 26780164 PRJEB29441_P_NODE_45381_length_162_cov_0.902655_g44940_i0 PRJEB29441 45381 162 0.902655 1.4623011 Candidatus Amesbacteria bacterium RIFCSPHIGHO2_ 1932011 Bacteria Bacteria 83.2 6.2e-17   NR OGC91774.1 1797253 g44940 i0 69.8 0.981481481481482 53 16 98.1 0 2 160 139 191 OGC91774.1 MAG: hypothetical protein A2876_01550 [Candidatus Amesbacteria bacterium RIFCSPHIGHO2_01_FULL_48_32b] diamond 159 83.2 1 Bacteria Bacteria candidate phyla   Candidatus Amesiibacteriota         Candidatus Amesbacteria bacterium RIFCSPHIGHO2_01_FULL_48_32b
26811775 26811775 PRJEB29441_P_NODE_45141_length_162_cov_1.557522_g44700_i0 PRJEB29441 45141 162 1.557522 2.52318564 Candidatus Dojkabacteria bacterium 2099670 Bacteria Bacteria 49.7 5.48e-6   NR HRN86952.1 2099670 g44700 i0 88 0.462962962962963 25 3 46.3 0 39 113 10 34 HRN86952.1 hypothetical protein [Candidatus Dojkabacteria bacterium] diamond 75 49.7 1 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
26875354 26875354 PRJEB29441_P_NODE_44281_length_163_cov_0.894737_g43840_i0 PRJEB29441 44281 163 0.894737 1.45842131 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 64.3 2.72e-10   NR NBP59149.1 2802965 g43840 i0 54.7 0.975460122699387 53 24 97.5 0 162 4 145 197 NBP59149.1 hypothetical protein [Candidatus Elulimicrobium humile] diamond 159 64.3 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile
26938179 26938179 PRJEB29441_P_NODE_42122_length_165_cov_0.879310_g41681_i0 PRJEB29441 42122 165 0.87931 1.4508615 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 57.8 8.03e-9   NR MCA9330407.1 2026720 g41681 i0 53.8 0.945454545454545 52 23 92.7 1 3 155 45 96 MCA9330407.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 156 57.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
27343061 27343061 PRJEB29441_P_NODE_46203_length_162_cov_0.902655_g45762_i0 PRJEB29441 46203 162 0.902655 1.4623011 Candidatus Saccharimonadota 95818 Bacteria Bacteria 102 9.04e-24   NR RKW02091.1 1917697 g45762 i0 92.6 9 54 4 100 0 1 162 88 141 RKW02091.1 MAG: DUF87 domain-containing protein, partial [Candidatus Saccharimonas sp.] diamond 1458 102 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
28486051 28486051 PRJEB29441_P_NODE_45427_length_162_cov_0.902655_g44986_i0 PRJEB29441 45427 162 0.902655 1.4623011 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 58.5 3.24e-8   NR HEY7559028.1 2838779 g44986 i0 47.2 0.981481481481482 53 28 98.1 0 161 3 175 227 HEY7559028.1 ATP-binding protein [Candidatus Binatia bacterium] diamond 159 58.5 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29180857 29180857 PRJEB29441_P_NODE_35249_length_176_cov_1.259843_g34808_i0 PRJEB29441 35249 176 1.259843 2.21732368 Minisyncoccota bacterium 2053589 Bacteria Bacteria 56.2 1.68e-7   NR HVY72917.1 2053589 g34808 i0 96.6 0.494318181818182 29 1 49.4 0 85 171 1 29 HVY72917.1 thioredoxin domain-containing protein [Candidatus Paceibacterota bacterium] diamond 87 56.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29710526 29710526 PRJEB29441_P_NODE_41930_length_165_cov_0.879310_g41489_i0 PRJEB29441 41930 165 0.87931 1.4508615 Bacteria 2 Bacteria Bacteria 55.5 3.9e-7   NR HAM56058.1 2053607 g41489 i0 93.3 4.90909090909091 30 2 54.5 0 1 90 158 187 HAM56058.1 phage recombination protein Bet [Candidatus Rokuibacteriota bacterium] diamond 810 55.5 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
30475700 30475700 PRJEB29441_P_NODE_47173_length_161_cov_0.910714_g46732_i0 PRJEB29441 47173 161 0.910714 1.46624954 Patescibacteria group bacterium 2052139 Bacteria Bacteria 76.6 3.24e-15   NR MCL5667330.1 2052139 g46732 i0 66.7 0.950310559006211 51 17 95 0 154 2 15 65 MCL5667330.1 hypothetical protein [Patescibacteria group bacterium] diamond 153 76.6 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31834709 31834709 PRJEB29441_P_NODE_46517_length_161_cov_1.562500_g46076_i0 PRJEB29441 46517 161 1.5625 2.515625 Patescibacteria group bacterium 2052139 Bacteria Bacteria 87 1.2e-19   NR MEK7228061.1 2052139 g46076 i0 89.8 1.82608695652174 49 5 91.3 0 6 152 143 191 MEK7228061.1 Holliday junction branch migration protein RuvA [Patescibacteria group bacterium] diamond 294 87 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31929739 31929739 PRJEB29441_P_NODE_40297_length_166_cov_0.871795_g39856_i0 PRJEB29441 40297 166 0.871795 1.4471797 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 95.9 1.14e-22   NR MBP6981164.1 2044595 g39856 i0 80 0.993975903614458 55 11 99.4 0 166 2 6 60 MBP6981164.1 50S ribosomal protein L1 [Candidatus Altimarinota bacterium] diamond 165 95.9 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32246551 32246551 PRJEB29441_P_NODE_40298_length_166_cov_0.871795_g39857_i0 PRJEB29441 40298 166 0.871795 1.4471797 Candidatus Uhrbacteria bacterium 2053634 Bacteria Bacteria 59.7 1.37e-8   NR MCR4314185.1 2053634 g39857 i0 59.1 0.795180722891566 44 18 79.5 0 133 2 133 176 MCR4314185.1 DEAD/DEAH box helicase [Candidatus Uhrbacteria bacterium] diamond 132 59.7 1 Bacteria Bacteria candidate phyla   Candidatus Uhriibacteriota         Candidatus Uhrbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;