RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJEB2925" and tax_phylum = "Cnidaria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB2925 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3852208 3852208 PRJEB2925_P_NODE_12404_length_304_cov_1.553903_g11127_i0 PRJEB2925 12404 304 1.553903 4.72386512 Paramuricea clavata 317549 Cnidaria other_Eukaryota 67.8 3.05e-12   NR CAB4019690.1 317549 g11127 i0 52.4 2.64473684210526 63 30 62.2 0 302 114 27 89 CAB4019690.1 60S ribosomal L4-1, partial [Paramuricea clavata] diamond 804 67.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Plexauridae Paramuricea Paramuricea clavata
14054281 14054281 PRJEB2925_P_NODE_4912_length_615_cov_2.175862_g3914_i0 PRJEB2925 4912 615 2.175862 13.3815513 Opisthokonta 33154 Cnidaria other_Eukaryota 191 5.919999999999999e-57   NR XP_057289659.1 13093 g3914 i0 66.4 16.0536585365854 152 49 74.1 1 143 598 63 212 XP_057289659.1 60S ribosomal protein L7a-like [Hydractinia symbiolongicarpus] diamond 9873 191 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
26653098 26653098 PRJEB2925_P_NODE_14561_length_267_cov_1.732759_g13283_i0 PRJEB2925 14561 267 1.732759 4.62646653 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 79 9.38e-15   NR XP_066918755.1 252671 g13283 i0 54.5 0.98876404494382 88 40 98.9 0 4 267 716 803 XP_066918755.1 major vault protein-like isoform X2 [Clytia hemisphaerica] diamond 264 79 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
28416526 28416526 PRJEB2925_P_NODE_10206_length_360_cov_1.516923_g8934_i0 PRJEB2925 10206 360 1.516923 5.4609228 Anthozoa 6101 Cnidaria other_Eukaryota 52.8 3.78e-5   NR XP_031551396.1 6105 g8934 i0 56.8 6.7 37 16 30.8 0 131 21 211 247 XP_031551396.1 uncharacterized protein LOC116288709 [Actinia tenebrosa] diamond 2412 53.1 0.994350282485876 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
30626925 30626925 PRJEB2925_P_NODE_6673_length_501_cov_2.660944_g5524_i0 PRJEB2925 6673 501 2.660944 13.33132944 Anthozoa 6101 Cnidaria other_Eukaryota 121 7.71e-32   NR XP_068680699.1 591990 g5524 i0 49.6 3.98203592814371 131 66 78.4 0 42 434 2 132 XP_068680699.1 large ribosomal subunit protein eL14-like [Montipora foliosa] diamond 1995 122 0.991803278688525 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Montipora Montipora foliosa
32087986 32087986 PRJEB2925_P_NODE_13918_length_276_cov_2.315353_g12640_i0 PRJEB2925 13918 276 2.315353 6.39037428 Pocillopora verrucosa 203993 Cnidaria other_Eukaryota 54.7 3.33e-6   NR XP_058954688.2 203993 g12640 i0 43.1 0.782608695652174 72 32 72.8 4 266 66 372 439 XP_058954688.2 ectin isoform X2 [Pocillopora verrucosa] diamond 216 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora verrucosa

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;