contig_metadata
11 rows where analysis = "diamond", bioproject = "PRJEB28589" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26678288 | 26678288 | PRJEB28589_S_NODE_12261_length_217_cov_4.370588_g12153_i0 | PRJEB28589 | 12261 | 217 | 4.370588 | 9.48417596 | root | 1 | Root_unresolved | Root_unresolved | 42 | 0.0489 | NR | MCR4399154.1 | 1879010 | g12153 | i0 | 39.6 | 3.70506912442396 | 48 | 28 | 65 | 1 | 72 | 212 | 551 | 598 | MCR4399154.1 glycoside hydrolase family 15 protein [Bacillota bacterium] | diamond | 804 | 42 | 1 | Bacteria | Bacillati | Bacillota | Bacillota bacterium | ||||||
| 27127656 | 27127656 | PRJEB28589_S_NODE_10222_length_245_cov_2.060606_g10114_i0 | PRJEB28589 | 10222 | 245 | 2.060606 | 5.0484847 | Weissella minor | 1620 | Bacteria | Bacteria | 87.4 | 7.18e-18 | NR | WP_057788955.1 | 1620 | g10114 | i0 | 89.4 | 0.575510204081633 | 47 | 5 | 57.6 | 0 | 244 | 104 | 712 | 758 | WP_057788955.1 ATP-dependent Clp protease ATP-binding subunit [Weissella minor] | diamond | 141 | 87.4 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Weissella | Weissella minor | ||
| 27728622 | 27728622 | PRJEB28589_S_NODE_6044_length_307_cov_4.761538_g5936_i0 | PRJEB28589 | 6044 | 307 | 4.761538 | 14.61792166 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 170 | 3.63e-47 | NR | MBR4287093.1 | 2044939 | g5936 | i0 | 88.4 | 0.928338762214984 | 95 | 11 | 92.8 | 0 | 21 | 305 | 584 | 678 | MBR4287093.1 ferrous iron transport protein B [Clostridia bacterium] | diamond | 285 | 170 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 28423066 | 28423066 | PRJEB28589_S_NODE_11826_length_223_cov_4.068182_g11718_i0 | PRJEB28589 | 11826 | 223 | 4.068182 | 9.07204586 | Tepidibacter thalassicus | 214905 | Bacteria | Bacteria | 43.9 | 0.011 | NR | WP_072723727.1 | 214905 | g11718 | i0 | 42.9 | 0.847533632286996 | 63 | 32 | 79.4 | 2 | 216 | 40 | 268 | 330 | WP_072723727.1 elongator complex protein 3 [Tepidibacter thalassicus] | diamond | 189 | 43.9 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Tepidibacter | Tepidibacter thalassicus | ||
| 29023124 | 29023124 | PRJEB28589_S_NODE_10308_length_244_cov_1.360406_g10200_i0 | PRJEB28589 | 10308 | 244 | 1.360406 | 3.31939064 | Lachnospiraceae bacterium | 1898203 | Bacteria | Bacteria | 161 | 8.459999999999999e-47 | NR | MBO4799234.1 | 1898203 | g10200 | i0 | 93.8 | 1.9672131147541 | 80 | 5 | 98.4 | 0 | 241 | 2 | 93 | 172 | MBO4799234.1 PEGA domain-containing protein [Lachnospiraceae bacterium] | diamond | 480 | 161 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnospiraceae bacterium | |||
| 29054503 | 29054503 | PRJEB28589_S_NODE_5008_length_325_cov_2.931655_g4900_i0 | PRJEB28589 | 5008 | 325 | 2.931655 | 9.52787875 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 43.5 | 0.0457 | NR | MEI3356097.1 | 2044939 | g4900 | i0 | 27.4 | 0.775384615384615 | 84 | 55 | 77.5 | 1 | 64 | 315 | 196 | 273 | MEI3356097.1 radical SAM protein [Clostridia bacterium] | diamond | 252 | 43.5 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 29306876 | 29306876 | PRJEB28589_S_NODE_4309_length_339_cov_4.229452_g4201_i0 | PRJEB28589 | 4309 | 339 | 4.229452 | 14.33784228 | Gemella haemolysans | 1379 | Bacteria | Bacteria | 171 | 1.56e-50 | NR | WP_274459383.1 | 1379 | g4201 | i0 | 81.7 | 2.02654867256637 | 115 | 18 | 99.1 | 1 | 337 | 2 | 149 | 263 | WP_274459383.1 membrane protein insertase YidC [Gemella haemolysans] | diamond | 687 | 171 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Gemellaceae | Gemella | Gemella haemolysans | ||
| 30570105 | 30570105 | PRJEB28589_S_NODE_8133_length_275_cov_2.013158_g8025_i0 | PRJEB28589 | 8133 | 275 | 2.013158 | 5.5361845 | Lachnospiraceae bacterium | 1898203 | Bacteria | Bacteria | 73.9 | 2.42e-14 | NR | MBQ2205275.1 | 1898203 | g8025 | i0 | 68.1 | 0.512727272727273 | 47 | 14 | 51.3 | 1 | 133 | 273 | 5 | 50 | MBQ2205275.1 hypothetical protein [Lachnospiraceae bacterium] | diamond | 141 | 73.9 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnospiraceae bacterium | |||
| 30879764 | 30879764 | PRJEB28589_S_NODE_9814_length_250_cov_4.876847_g9706_i0 | PRJEB28589 | 9814 | 250 | 4.876847 | 12.1921175 | root | 1 | Root_unresolved | Root_unresolved | 70.9 | 1.3e-12 | NR | QHG80001.1 | 1280 | g9706 | i0 | 68.6 | 1.224 | 51 | 16 | 61.2 | 0 | 200 | 48 | 36 | 86 | QHG80001.1 hypothetical protein D7B62_12515 [Staphylococcus aureus] | diamond | 306 | 70.9 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 31201838 | 31201838 | PRJEB28589_S_NODE_855_length_553_cov_8.586957_g757_i0 | PRJEB28589 | 855 | 553 | 8.586957 | 47.48587221 | Romboutsia sp. 1 | 1965302 | Bacteria | Bacteria | 197 | 6.039999999999998e-56 | NR | WP_147516148.1 | 2787112 | g757 | i0 | 73.4 | 1.34538878842676 | 124 | 33 | 67.3 | 0 | 374 | 3 | 561 | 684 | WP_147516148.1 molybdopterin oxidoreductase family protein [Romboutsia sp. 1001713B170207_170306_H8] | diamond | 744 | 197 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Romboutsia | Romboutsia sp. 1001713B170207_170306_H8 | ||
| 31929726 | 31929726 | PRJEB28589_S_NODE_6437_length_302_cov_1.686275_g6329_i0 | PRJEB28589 | 6437 | 302 | 1.686275 | 5.0925505 | Clostridium sp. | 1506 | Bacteria | Bacteria | 50.4 | 1.43e-4 | NR | HCW52140.1 | 1506 | g6329 | i0 | 35.4 | 0.78476821192053 | 79 | 45 | 78.5 | 2 | 239 | 3 | 360 | 432 | HCW52140.1 cell wall-binding protein [Clostridium sp.] | diamond | 237 | 50.4 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;