RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB28589" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJEB28589 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28644061 28644061 PRJEB28589_S_NODE_11547_length_227_cov_2.588889_g11439_i0 PRJEB28589 11547 227 2.588889 5.87677803 Nanning tick virus 2 2972366 Viruses Viruses 48.1 2.13e-4   NR UYL95419.1 2972366 g11439 i0 44.3 0.806167400881057 61 33 79.3 1 225 46 117 177 UYL95419.1 MAG: hypothetical protein [Nanning tick virus 2] diamond 183 48.1 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Tymoviridae   Nanning tick virus 2
30823117 30823117 PRJEB28589_S_NODE_3514_length_355_cov_7.675325_g3406_i0 PRJEB28589 3514 355 7.675325 27.24740375 Botourmiaviridae sp. 2808997 Viruses Viruses 82 2.29e-15   NR UYL94592.1 2808997 g3406 i0 62.9 0.591549295774648 70 25 59.2 1 211 2 1 69 UYL94592.1 MAG: RNA-dependent RNA polymerase, partial [Botourmiaviridae sp.] diamond 210 82 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.
31012693 31012693 PRJEB28589_S_NODE_4435_length_336_cov_12.013841_g4327_i0 PRJEB28589 4435 336 12.013841 40.36650576 Plasmopara viticola lesion associated alpha-like virus 1 2692080 Viruses Viruses 58.5 9.18e-8   NR QHD64750.1 2692080 g4327 i0 46.3 0.482142857142857 54 29 48.2 0 4 165 130 183 QHD64750.1 ORF2 [Plasmopara viticola lesion associated alpha-like virus 1] diamond 162 58.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Plasmopara viticola lesion associated alpha-like virus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;