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contig_metadata

32 rows where analysis = "diamond", bioproject = "PRJEB28589" and tax_clade = "FCB group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • FCB group · 32 ✖

bioproject 1

  • PRJEB28589 · 32 ✖

analysis 1

  • diamond · 32 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3538617 3538617 PRJEB28589_S_NODE_11143_length_232_cov_3.064865_g11035_i0 PRJEB28589 11143 232 3.064865 7.1104868 Fluviicola 332102 Bacteria Bacteria 145 5.39e-42   NR MBN9293405.1 2044941 g11035 i0 90.9 2.98706896551724 77 7 99.6 0 2 232 64 140 MBN9293405.1 peroxiredoxin [Flavobacteriia bacterium] diamond 693 145 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia       Flavobacteriia bacterium
3852132 3852132 PRJEB28589_S_NODE_3564_length_354_cov_6.700326_g3456_i0 PRJEB28589 3564 354 6.700326 23.71915404 Pedobacter arcticus 752140 Bacteria Bacteria 212 8.099999999999999e-68   NR WP_017257535.1 752140 g3456 i0 94.1 2 118 7 100 0 354 1 22 139 WP_017257535.1 50S ribosomal protein L17 [Pedobacter arcticus] diamond 708 212 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter Pedobacter arcticus
3852151 3852151 PRJEB28589_S_NODE_5664_length_313_cov_3.661654_g5556_i0 PRJEB28589 5664 313 3.661654 11.46097702 Bacteroidota 976 Bacteria Bacteria 173 3.56e-49   NR WP_026977106.1 150172 g5556 i0 89.1 4.84025559105431 101 11 96.8 0 303 1 359 459 WP_026977106.1 ribonuclease E/G [Flavobacterium tegetincola] diamond 1515 173 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium tegetincola
12467127 12467127 PRJEB28589_S_NODE_2610_length_383_cov_5.892857_g2502_i0 PRJEB28589 2610 383 5.892857 22.56964231 Kaistella 2782231 Bacteria Bacteria 208 1.05e-61   NR WP_305520099.1 2762626 g2502 i0 81 6.90861618798956 126 24 98.7 0 382 5 218 343 WP_305520099.1 MULTISPECIES: S8 family serine peptidase [unclassified Kaistella] diamond 2646 208 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Kaistella  
14054177 14054177 PRJEB28589_S_NODE_7232_length_289_cov_3.834711_g7124_i0 PRJEB28589 7232 289 3.834711 11.08231479 Flavobacterium sp. 239 Bacteria Bacteria 159 2.06e-46   NR MBC7525111.1 239 g7124 i0 83.3 7.95155709342561 96 16 99.7 0 288 1 151 246 MBC7525111.1 twin-arginine translocase subunit TatC [Flavobacterium sp.] diamond 2298 159 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp.
16602804 16602804 PRJEB28589_S_NODE_5634_length_313_cov_5.484962_g5526_i0 PRJEB28589 5634 313 5.484962 17.16793106 Flavobacterium sp. N227 239 Bacteria Bacteria 203 3.36e-62   NR WP_264559972.1 2986831 g5526 i0 88.5 0.996805111821086 104 12 99.7 0 1 312 249 352 WP_264559972.1 endonuclease/exonuclease/phosphatase family protein [Flavobacterium sp. N2270] diamond 312 203 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp. N2270
20426613 20426613 PRJEB28589_S_NODE_10497_length_241_cov_3.525773_g10389_i0 PRJEB28589 10497 241 3.525773 8.49711293 Flavobacterium sp. 239 Bacteria Bacteria 152 2.02e-45   NR WP_396178262.1 239 g10389 i0 87.5 1.99170124481328 80 10 99.6 0 1 240 65 144 WP_396178262.1 hypothetical protein [Flavobacterium sp.] diamond 480 152 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp.
26589763 26589763 PRJEB28589_S_NODE_10961_length_235_cov_1.234043_g10853_i0 PRJEB28589 10961 235 1.234043 2.90000105 Flavobacterium gillisiae 150146 Bacteria Bacteria 112 4.82e-30   NR WP_091084280.1 150146 g10853 i0 70.1 0.982978723404255 77 23 98.3 0 3 233 6 82 WP_091084280.1 hypothetical protein [Flavobacterium gillisiae] diamond 231 112 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium gillisiae
27222687 27222687 PRJEB28589_S_NODE_8363_length_271_cov_4.397321_g8255_i0 PRJEB28589 8363 271 4.397321 11.91673991 Gillisia mitskevichiae 270921 Bacteria Bacteria 109 4.31e-26   NR WP_121344352.1 270921 g8255 i0 100 0.608856088560886 55 0 60.9 0 166 2 1 55 WP_121344352.1 DUF3095 family protein [Gillisia mitskevichiae] diamond 165 109 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Gillisia Gillisia mitskevichiae
27317895 27317895 PRJEB28589_S_NODE_7823_length_280_cov_2.824034_g7715_i0 PRJEB28589 7823 280 2.824034 7.9072952 Rikenellaceae bacterium 2049048 Bacteria Bacteria 45.1 0.00877   NR MCC8019901.1 2049048 g7715 i0 32.8 0.685714285714286 64 40 68.6 1 248 57 60 120 MCC8019901.1 BamA/TamA family outer membrane protein [Rikenellaceae bacterium] diamond 192 45.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Rikenellaceae   Rikenellaceae bacterium
27690540 27690540 PRJEB28589_S_NODE_3244_length_362_cov_7.907937_g3136_i0 PRJEB28589 3244 362 7.907937 28.62673194 Bacteroidia 200643 Bacteria Bacteria 45.4 0.0163   NR MCH3970978.1 59823 g3136 i0 33 2.23756906077348 97 59 79.6 3 343 56 169 260 MCH3970978.1 helix-turn-helix domain-containing protein [Prevotella sp.] diamond 810 45.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella Prevotella sp.
27823154 27823154 PRJEB28589_S_NODE_9884_length_249_cov_4.524752_g9776_i0 PRJEB28589 9884 249 4.524752 11.26663248 Flavobacterium acetivorans 2893883 Bacteria Bacteria 142 5.12e-38   NR WP_230062466.1 2893883 g9776 i0 89 2.95180722891566 82 9 98.8 0 247 2 88 169 WP_230062466.1 sensor histidine kinase [Flavobacterium acetivorans] diamond 735 142 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium acetivorans
27886070 27886070 PRJEB28589_S_NODE_4985_length_325_cov_5.032374_g4877_i0 PRJEB28589 4985 325 5.032374 16.3552155 Flavobacterium gillisiae 150146 Bacteria Bacteria 218 1.32e-69   NR WP_091090510.1 150146 g4877 i0 98.1 0.996923076923077 108 2 99.7 0 1 324 66 173 WP_091090510.1 hypothetical protein [Flavobacterium gillisiae] diamond 324 218 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium gillisiae
28075455 28075455 PRJEB28589_S_NODE_4165_length_342_cov_3.484746_g4057_i0 PRJEB28589 4165 342 3.484746 11.91783132 Flavobacterium degerlachei 229203 Bacteria Bacteria 201 6.11e-64   NR WP_091431721.1 229203 g4057 i0 91.2 1 114 10 100 0 342 1 23 136 WP_091431721.1 MarR family winged helix-turn-helix transcriptional regulator [Flavobacterium degerlachei] diamond 342 201 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium degerlachei
28075456 28075456 PRJEB28589_S_NODE_5705_length_312_cov_5.683019_g5597_i0 PRJEB28589 5705 312 5.683019 17.73101928 Flavobacteriales bacterium 2021391 Bacteria Bacteria 104 1.47e-23   NR MBH2022865.1 2021391 g5597 i0 51.5 0.990384615384615 103 50 99 0 1 309 184 286 MBH2022865.1 SMC family ATPase [Flavobacteriales bacterium] diamond 309 104 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales     Flavobacteriales bacterium
28328012 28328012 PRJEB28589_S_NODE_3766_length_349_cov_4.910596_g3658_i0 PRJEB28589 3766 349 4.910596 17.13798004 Flavobacterium ponti 665133 Bacteria Bacteria 194 4.1699999999999995e-61   NR WP_338375319.1 665133 g3658 i0 77.9 1.94269340974212 113 25 97.1 0 1 339 33 145 WP_338375319.1 hypothetical protein [Flavobacterium ponti] diamond 678 194 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium ponti
28391276 28391276 PRJEB28589_S_NODE_4066_length_344_cov_2.841751_g3958_i0 PRJEB28589 4066 344 2.841751 9.77562344 Flavobacterium sp. 239 Bacteria Bacteria 138 2.19e-39   NR WP_320814650.1 239 g3958 i0 93.5 0.671511627906977 77 5 67.2 0 1 231 57 133 WP_320814650.1 biopolymer transporter ExbD [Flavobacterium sp.] diamond 231 138 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp.
28644066 28644066 PRJEB28589_S_NODE_2787_length_376_cov_5.507599_g2679_i0 PRJEB28589 2787 376 5.507599 20.70857224 Flavobacterium 237 Bacteria Bacteria 68.2 7.84e-12   NR WP_264533440.1 237 g2679 i0 53.3 3.91755319148936 75 24 54.3 3 284 81 51 121 WP_264533440.1 MULTISPECIES: hypothetical protein [Flavobacterium] diamond 1473 68.2 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium  
28991520 28991520 PRJEB28589_S_NODE_4288_length_339_cov_6.571918_g4180_i0 PRJEB28589 4288 339 6.571918 22.27880202 uncultured Pedobacter sp. 246139 Bacteria Bacteria 85.5 1.81e-18   NR WP_294898448.1 246139 g4180 i0 78.6 0.991150442477876 56 10 49.6 1 169 2 38 91 WP_294898448.1 cold-shock protein [uncultured Pedobacter sp.] diamond 336 85.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter uncultured Pedobacter sp.
29837116 29837116 PRJEB28589_S_NODE_11891_length_222_cov_4.062857_g11783_i0 PRJEB28589 11891 222 4.062857 9.01954254 Ferruginibacter 1004303 Bacteria Bacteria 135 5.22e-39   NR WP_379709801.1 1310416 g11783 i0 87.7 25.6486486486486 73 9 98.6 0 2 220 20 92 WP_379709801.1 50S ribosomal protein L19 [Ferruginibacter yonginensis] diamond 5694 136 0.992647058823529 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Ferruginibacter Ferruginibacter yonginensis
29868826 29868826 PRJEB28589_S_NODE_11131_length_232_cov_4.243243_g11023_i0 PRJEB28589 11131 232 4.243243 9.84432376 Chryseobacterium 59732 Bacteria Bacteria 101 8.28e-23   NR WP_185289924.1 1241981 g11023 i0 66.2 2.87068965517241 74 25 95.7 0 223 2 1 74 WP_185289924.1 WD40/YVTN/BNR-like repeat-containing protein [Chryseobacterium lactis] diamond 666 102 0.990196078431373 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Chryseobacterium Chryseobacterium lactis
29938566 29938566 PRJEB28589_S_NODE_1791_length_428_cov_3.469816_g1683_i0 PRJEB28589 1791 428 3.469816 14.85081248 Winogradskyella endarachnes 2681965 Bacteria Bacteria 54.3 2.17e-5   NR WP_157363580.1 2681965 g1683 i0 29.3 0.86214953271028 123 83 86.2 2 419 51 51 169 WP_157363580.1 tetratricopeptide repeat protein [Winogradskyella endarachnes] diamond 369 54.3 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Winogradskyella Winogradskyella endarachnes
30096311 30096311 PRJEB28589_S_NODE_8452_length_270_cov_2.744395_g8344_i0 PRJEB28589 8452 270 2.744395 7.4098665 Pelobium sp. 1903174 Bacteria Bacteria 150 4.82e-44   NR HEX7366764.1 1903174 g8344 i0 87.2 1.91111111111111 86 11 95.6 0 268 11 97 182 HEX7366764.1 ATP synthase F1 subunit delta [Pelobium sp.] diamond 516 150 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pelobium Pelobium sp.
31012697 31012697 PRJEB28589_S_NODE_6155_length_306_cov_2.544402_g6047_i0 PRJEB28589 6155 306 2.544402 7.78587012 Anseongella sp. 2023704 Bacteria Bacteria 133 3.26e-36   NR HEY9561858.1 2023704 g6047 i0 53 0.980392156862745 100 46 98 1 304 5 156 254 HEY9561858.1 hypothetical protein [Anseongella sp.] diamond 300 133 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Anseongella Anseongella sp.
31487163 31487163 PRJEB28589_S_NODE_956_length_534_cov_5.320329_g856_i0 PRJEB28589 956 534 5.320329 28.41055686 Bacteroides sp. SM1_62 1703351 Bacteria Bacteria 55.5 2e-5   NR KPL20218.1 1703351 g856 i0 32.1 2.93820224719101 109 72 60.1 1 455 135 61 169 KPL20218.1 MAG: hypothetical protein AMS23_11355, partial [Bacteroides sp. SM1_62] diamond 1569 55.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides sp. SM1_62
31550439 31550439 PRJEB28589_S_NODE_2756_length_377_cov_5.769697_g2648_i0 PRJEB28589 2756 377 5.769697 21.75175769 Bacteroidales bacterium 2030927 Bacteria Bacteria 45.1 0.0258   NR MBI9055661.1 2030927 g2648 i0 29.1 0.628647214854111 79 51 58.9 1 38 259 66 144 MBI9055661.1 GHKL domain-containing protein [Bacteroidales bacterium] diamond 237 45.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales     Bacteroidales bacterium
31575471 31575471 PRJEB28589_S_NODE_11656_length_226_cov_1.067039_g11548_i0 PRJEB28589 11656 226 1.067039 2.41150814 Candidatus Cardinium 273135 Bacteria Bacteria 58.2 1.1e-7   NR WP_176453742.1 672794 g11548 i0 42.1 2.01769911504425 76 40 95.6 2 3 218 610 685 WP_176453742.1 ankyrin repeat domain-containing protein [Cardinium endosymbiont of Bemisia tabaci] diamond 456 58.2 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Amoebophilaceae Candidatus Cardinium Cardinium endosymbiont of Bemisia tabaci
31613454 31613454 PRJEB28589_S_NODE_3056_length_367_cov_8.031250_g2948_i0 PRJEB28589 3056 367 8.03125 29.4746875 Pseudopedobacter sp. 1936787 Bacteria Bacteria 117 1.27e-29   NR MBC7614238.1 1936787 g2948 i0 88.7 0.506811989100817 62 7 50.7 0 366 181 197 258 MBC7614238.1 LexA family transcriptional regulator [Pseudopedobacter sp.] diamond 186 117 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pseudopedobacter Pseudopedobacter sp.
31954831 31954831 PRJEB28589_S_NODE_2457_length_389_cov_3.985380_g2349_i0 PRJEB28589 2457 389 3.98538 15.5031282 Bacteroidota 976 Bacteria Bacteria 47.8 0.00325   NR MBN8854020.1 2044944 g2349 i0 35.5 2.25964010282776 62 34 47.8 1 345 160 267 322 MBN8854020.1 ABC transporter permease [Sphingobacteriales bacterium] diamond 879 47.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales     Sphingobacteriales bacterium
31993046 31993046 PRJEB28589_S_NODE_3358_length_359_cov_6.051282_g3250_i0 PRJEB28589 3358 359 6.051282 21.72410238 Pedobacter cryophilus 2571271 Bacteria Bacteria 87.4 1.35e-18   NR WP_136825411.1 2571271 g3250 i0 85.7 1.63788300835655 49 7 40.9 0 271 125 152 200 WP_136825411.1 acetolactate synthase small subunit [Pedobacter cryophilus] diamond 588 87.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter Pedobacter cryophilus
32594239 32594239 PRJEB28589_S_NODE_7920_length_278_cov_4.943723_g7812_i0 PRJEB28589 7920 278 4.943723 13.74354994 Bacteroidota bacterium 1898104 Bacteria Bacteria 43.1 0.0408   NR MEL6976873.1 1898104 g7812 i0 33.8 0.798561151079137 74 44 79.9 1 17 238 271 339 MEL6976873.1 TonB-dependent receptor [Bacteroidota bacterium] diamond 222 43.1 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
32688429 32688429 PRJEB28589_S_NODE_12460_length_215_cov_1.244048_g12352_i0 PRJEB28589 12460 215 1.244048 2.6747032 Chitinophagaceae bacterium 1869212 Bacteria Bacteria 45.8 4.17e-4   NR MEI2711165.1 1869212 g12352 i0 39.6 0.73953488372093 53 32 74 0 189 31 2 54 MEI2711165.1 hypothetical protein [Chitinophagaceae bacterium] diamond 159 45.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;