RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB28062" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJEB28062 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12779022 12779022 PRJEB28062_P_NODE_7731_length_1419_cov_40.270431_g6311_i0 PRJEB28062 7731 1419 40.270431 571.43741589 Alphacarmovirus 1911599 Viruses Viruses 573 7.229999999999998e-196   NR YP_004191789.1 943272 g6311 i0 70 3.88372093023256 373 112 78.9 0 299 1417 316 688 YP_004191789.1 p87 [Honeysuckle ringspot virus] diamond 5511 578 0.991349480968858 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae Alphacarmovirus Alphacarmovirus lonicerae
26780084 26780084 PRJEB28062_P_NODE_129221_length_243_cov_1.788235_g126857_i0 PRJEB28062 129221 243 1.788235 4.34541105 Pleurotus pulmonarius virga-like virus 1 3231516 Viruses Viruses 55.1 1.64e-6   NR XCI72490.1 3231516 g126857 i0 40 0.925925925925926 75 42 92.6 1 18 242 325 396 XCI72490.1 methyltransferase [Pleurotus pulmonarius virga-like virus 1] diamond 225 55.1 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae   Pleurotus pulmonarius virga-like virus 1
29528036 29528036 PRJEB28062_P_NODE_85810_length_358_cov_22.459649_g83448_i0 PRJEB28062 85810 358 22.459649 80.40554342 Ripoflin virus 3130381 Viruses Viruses 47 0.00395   NR WZH59543.1 3130381 g83448 i0 30.5 0.879888268156425 105 71 87.2 2 26 337 164 267 WZH59543.1 MAG: hypothetical protein [Ripoflin virus] diamond 315 47 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Ripoflin virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;