RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB28062" and tax_phylum = "Candidatus Uhriibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Uhriibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB28062 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28707114 28707114 PRJEB28062_P_NODE_52927_length_487_cov_18.432367_g50574_i0 PRJEB28062 52927 487 18.432367 89.76562729 Candidatus Uhrbacteria bacterium 2053634 Bacteria Bacteria 134 5.09e-36   NR MBI2550859.1 2053634 g50574 i0 68.2 1.08418891170431 88 28 54.2 0 478 215 131 218 MBI2550859.1 hypothetical protein [Candidatus Uhrbacteria bacterium] diamond 528 134 1 Bacteria Bacteria candidate phyla   Candidatus Uhriibacteriota         Candidatus Uhrbacteria bacterium
30089822 30089822 PRJEB28062_P_NODE_94772_length_330_cov_7.322957_g92410_i0 PRJEB28062 94772 330 7.322957 24.1657581 Bacteria 2 Bacteria Bacteria 58.5 1.94e-7   NR KKR86943.1 1618985 g92410 i0 47.7 2.49090909090909 65 32 57.3 1 208 20 2 66 KKR86943.1 MAG: ABC-3 protein [Candidatus Uhrbacteria bacterium GW2011_GWC2_41_11] diamond 822 58.9 0.99320882852292 Bacteria Bacteria candidate phyla   Candidatus Uhriibacteriota         Candidatus Uhrbacteria bacterium GW2011_GWC2_41_11
32119754 32119754 PRJEB28062_P_NODE_54478_length_479_cov_3.940887_g52125_i0 PRJEB28062 54478 479 3.940887 18.87684873 Candidatus Uhrbacteria bacterium 2053634 Bacteria Bacteria 62 3.49e-9   NR MFH1252858.1 2053634 g52125 i0 32 1.2713987473904 103 70 64.5 0 82 390 1 103 MFH1252858.1 hypothetical protein [Candidatus Uhrbacteria bacterium] diamond 609 62 1 Bacteria Bacteria candidate phyla   Candidatus Uhriibacteriota         Candidatus Uhrbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;