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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJEB28062" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB28062 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2575398 2575398 PRJEB28062_P_NODE_79323_length_379_cov_5.901961_g76961_i0 PRJEB28062 79323 379 5.901961 22.36843219 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 229 1.66e-71   NR MCG3175877.1 2035772 g76961 i0 100 0.878627968337731 111 0 87.9 0 355 23 178 288 MCG3175877.1 3-oxoacyl-[acyl-carrier-protein] synthase 2 [Candidatus Omnitrophota bacterium] diamond 333 229 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
12778564 12778564 PRJEB28062_P_NODE_53851_length_482_cov_24.168704_g51498_i0 PRJEB28062 53851 482 24.168704 116.49315328 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 106 1.32e-23   NR HOU36870.1 2035772 g51498 i0 92.3 0.323651452282158 52 4 32.4 0 411 256 422 473 HOU36870.1 ISLre2 family transposase [Candidatus Omnitrophota bacterium] diamond 156 106 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27627203 27627203 PRJEB28062_P_NODE_42804_length_552_cov_32.070981_g40468_i0 PRJEB28062 42804 552 32.070981 177.03181512 Bacteria 2 Bacteria Bacteria 44.3 0.0152   NR MFA6358622.1 2035772 g40468 i0 42.2 0.5 45 25 23.9 1 182 51 35 79 MFA6358622.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 276 44.3 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28327967 28327967 PRJEB28062_P_NODE_24206_length_757_cov_14.871345_g22002_i0 PRJEB28062 24206 757 14.871345 112.57608165 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 331 3.719999999999999e-112   NR MDD4939545.1 2035772 g22002 i0 82.2 8.24306472919419 208 37 82.4 0 108 731 1 208 MDD4939545.1 phosphate signaling complex protein PhoU [Candidatus Omnitrophota bacterium] diamond 6240 331 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29843678 29843678 PRJEB28062_P_NODE_56191_length_470_cov_6.496222_g53837_i0 PRJEB28062 56191 470 6.496222 30.5322434 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 99.8 2.0499999999999999e-23   NR MBI1953793.1 2035772 g53837 i0 41.7 2.64893617021277 144 70 83.6 2 432 40 2 144 MBI1953793.1 type II secretion system protein [Candidatus Omnitrophota bacterium] diamond 1245 99.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30507156 30507156 PRJEB28062_P_NODE_109933_length_286_cov_11.507042_g107570_i0 PRJEB28062 109933 286 11.507042 32.91014012 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 95.1 1.54e-20   NR MDE2221840.1 2035772 g107570 i0 82.1 0.587412587412587 56 10 58.7 0 195 28 1 56 MDE2221840.1 30S ribosomal protein S12 methylthiotransferase RimO [Candidatus Omnitrophota bacterium] diamond 168 95.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30886315 30886315 PRJEB28062_P_NODE_66314_length_425_cov_12.315341_g63953_i0 PRJEB28062 66314 425 12.315341 52.34019925 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 237 3.03e-69   NR MCG3176815.1 2035772 g63953 i0 97.6 0.896470588235294 127 3 89.6 0 22 402 464 590 MCG3176815.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 381 237 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31487102 31487102 PRJEB28062_P_NODE_102636_length_307_cov_2.098291_g100273_i0 PRJEB28062 102636 307 2.098291 6.44175337 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 79.7 7.58e-15   NR MDP3704241.1 2035772 g100273 i0 80.9 0.9185667752443 47 9 45.9 0 2 142 70 116 MDP3704241.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 282 79.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31803059 31803059 PRJEB28062_P_NODE_30617_length_666_cov_5.042159_g28328_i0 PRJEB28062 30617 666 5.042159 33.58077894 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 84.7 7.45e-15   NR MFA5147284.1 2035772 g28328 i0 38.1 0.567567567567568 126 67 56.3 3 24 398 255 370 MFA5147284.1 Ig-like domain-containing protein [Candidatus Omnitrophota bacterium] diamond 378 84.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;