RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJEB28062" and tax_phylum = "Candidatus Iainarchaeota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Iainarchaeota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJEB28062 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27570278 27570278 PRJEB28062_P_NODE_27324_length_710_cov_3.348509_g25068_i0 PRJEB28062 27324 710 3.348509 23.7744139 Candidatus ainarchaeum sp. N/A Archaea Archaea 127 1.02e-30   NR MDD3159859.1 3018264 g25068 i0 39.3 0.946478873239437 224 129 93 6 28 687 63 283 MDD3159859.1 glycosyltransferase family 4 protein [Candidatus ainarchaeum sp.] diamond 672 127 1 Archaea   Nanobdellati Candidatus Iainarchaeota       Candidatus Iainarchaeum Candidatus ainarchaeum sp.
28043923 28043923 PRJEB28062_P_NODE_105805_length_298_cov_1.368889_g103442_i0 PRJEB28062 105805 298 1.368889 4.07928922 Candidatus Iainarchaeum archaeon 3101447 Archaea Archaea 47 3.46e-4   NR NPA76853.1 2026736 g103442 i0 43.3 0.604026845637584 60 29 60.4 3 188 9 3 57 NPA76853.1 hypothetical protein [Candidatus Iainarchaeum archaeon] diamond 180 47 1 Archaea   Nanobdellati Candidatus Iainarchaeota       Candidatus Iainarchaeum Candidatus Iainarchaeum archaeon
28075430 28075430 PRJEB28062_P_NODE_73485_length_399_cov_4.251534_g71123_i0 PRJEB28062 73485 399 4.251534 16.96362066 Candidatus Iainarchaeum archaeon 3101447 Archaea Archaea 51.2 2.08e-5   NR NPA76853.1 2026736 g71123 i0 43.3 0.451127819548872 60 29 45.1 2 187 8 3 57 NPA76853.1 hypothetical protein [Candidatus Iainarchaeum archaeon] diamond 180 51.2 1 Archaea   Nanobdellati Candidatus Iainarchaeota       Candidatus Iainarchaeum Candidatus Iainarchaeum archaeon
28644023 28644023 PRJEB28062_P_NODE_44747_length_538_cov_26.556989_g42408_i0 PRJEB28062 44747 538 26.556989 142.87660082 Candidatus Iainarchaeum archaeon 3101447 Archaea Archaea 46.2 0.0042   NR NPA76853.1 2026736 g42408 i0 38.6 0.317843866171004 57 32 31.8 1 352 522 3 56 NPA76853.1 hypothetical protein [Candidatus Iainarchaeum archaeon] diamond 171 46.2 1 Archaea   Nanobdellati Candidatus Iainarchaeota       Candidatus Iainarchaeum Candidatus Iainarchaeum archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;