RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJEB28062" and tax_phylum = "Candidatus Brockarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Brockarchaeota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJEB28062 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27444355 27444355 PRJEB28062_P_NODE_15883_length_955_cov_26.704082_g13983_i0 PRJEB28062 15883 955 26.704082 255.0239831 Candidatus Brockarchaeota archaeon 2815303 Archaea Archaea 275 2.5699999999999994e-89   NR MBO3757532.1 2815303 g13983 i0 93.6 0.43979057591623 140 9 44 0 939 520 26 165 MBO3757532.1 hypothetical protein [Candidatus Brockarchaeota archaeon] diamond 420 275 1 Archaea   Thermoproteati Candidatus Brockarchaeota         Candidatus Brockarchaeota archaeon
28012580 28012580 PRJEB28062_P_NODE_56625_length_468_cov_3.594937_g54271_i0 PRJEB28062 56625 468 3.594937 16.82430516 Candidatus Brockarchaeota archaeon 2815303 Archaea Archaea 96.3 1.85e-21   NR MBO3757533.1 2815303 g54271 i0 92.6 0.519230769230769 81 6 51.9 0 446 204 123 203 MBO3757533.1 hypothetical protein [Candidatus Brockarchaeota archaeon] diamond 243 96.3 1 Archaea   Thermoproteati Candidatus Brockarchaeota         Candidatus Brockarchaeota archaeon
30001742 30001742 PRJEB28062_P_NODE_104271_length_302_cov_2.820961_g101908_i0 PRJEB28062 104271 302 2.820961 8.51930222 Candidatus Brockarchaeota archaeon 2815303 Archaea Archaea 99.4 1.3799999999999998e-23   NR MBO3757532.1 2815303 g101908 i0 93.9 0.486754966887417 49 3 48.7 0 300 154 98 146 MBO3757532.1 hypothetical protein [Candidatus Brockarchaeota archaeon] diamond 147 99.4 1 Archaea   Thermoproteati Candidatus Brockarchaeota         Candidatus Brockarchaeota archaeon
32119735 32119735 PRJEB28062_P_NODE_129658_length_242_cov_8.047337_g127294_i0 PRJEB28062 129658 242 8.047337 19.47455554 Candidatus Brockarchaeota archaeon 2815303 Archaea Archaea 153 1.86e-46   NR MBO3757526.1 2815303 g127294 i0 93.3 0.929752066115702 75 5 93 0 226 2 16 90 MBO3757526.1 hypothetical protein [Candidatus Brockarchaeota archaeon] diamond 225 153 1 Archaea   Thermoproteati Candidatus Brockarchaeota         Candidatus Brockarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;