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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJEB28062" and tax_clade = "Discoba"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Discoba · 13 ✖

bioproject 1

  • PRJEB28062 · 13 ✖

analysis 1

  • diamond · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11503357 11503357 PRJEB28062_P_NODE_68730_length_416_cov_5.344023_g66369_i0 PRJEB28062 68730 416 5.344023 22.23113568 Leptomonas seymouri 5684 Euglenozoa other_Eukaryota 68.9 1.03e-11   NR KPI89133.1 5684 g66369 i0 57.6 3.13701923076923 66 25 47.6 2 398 201 44 106 KPI89133.1 putative RNA binding protein rbp16 [Leptomonas seymouri] diamond 1305 68.9 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas seymouri
20426160 20426160 PRJEB28062_P_NODE_76657_length_388_cov_7.453968_g74295_i0 PRJEB28062 76657 388 7.453968 28.92139584 Euglena gracilis 3039 Euglenozoa other_Eukaryota 213 1.03e-68   NR QLA09569.1 3039 g74295 i0 87.8 0.889175257731959 115 14 88.9 0 373 29 16 130 QLA09569.1 40S small subunit ribosomal protein uS8 [Euglena gracilis] diamond 345 213 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
27311454 27311454 PRJEB28062_P_NODE_51503_length_495_cov_13.834123_g49153_i0 PRJEB28062 51503 495 13.834123 68.47890885 Trypanosoma 5690 Euglenozoa other_Eukaryota 141 9.79e-39   NR RNF20249.1 5693 g49153 i0 66.7 5.23636363636364 120 34 69.7 3 445 101 97 215 RNF20249.1 histone H2A [Trypanosoma cruzi] diamond 2592 141 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
27570275 27570275 PRJEB28062_P_NODE_137564_length_203_cov_5.230769_g135200_i0 PRJEB28062 137564 203 5.230769 10.61846107 Euglena gracilis 3039 Euglenozoa other_Eukaryota 43.5 0.012   NR CAA43633.1 3039 g135200 i0 81.8 0.32512315270936 22 4 32.5 0 191 126 1034 1055 CAA43633.1 light harvesting chlorophyll a /b binding protein of PSII, partial [Euglena gracilis] diamond 66 43.5 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
27980833 27980833 PRJEB28062_P_NODE_121725_length_256_cov_4.950820_g119361_i0 PRJEB28062 121725 256 4.95082 12.6740992 Trypanosoma melophagium 715481 Euglenozoa other_Eukaryota 68.2 1.11e-11   NR XP_067190472.1 715481 g119361 i0 46 4.6171875 87 42 96.1 2 7 252 94 180 XP_067190472.1 uncharacterized protein LSM04_004772 [Trypanosoma melophagium] diamond 1182 68.2 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma melophagium
28605839 28605839 PRJEB28062_P_NODE_58887_length_457_cov_7.981771_g56528_i0 PRJEB28062 58887 457 7.981771 36.47669347 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 62.4 5.05e-8   NR DAA05885.1 3039 g56528 i0 83.3 1.4835886214442 36 4 22.3 2 77 178 122 157 DAA05885.1 TPA_inf: chloroplast light-harvesting complex II protein precursor Lhcbm5, partial [Euglena gracilis] diamond 678 62.4 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
28644010 28644010 PRJEB28062_P_NODE_134987_length_225_cov_6.006579_g132623_i0 PRJEB28062 134987 225 6.006579 13.51480275 Euglena gracilis 3039 Euglenozoa other_Eukaryota 128 1.05e-35   NR QLA09605.1 3039 g132623 i0 88.2 0.906666666666667 68 8 90.7 0 22 225 93 160 QLA09605.1 60S large subunit ribosomal protein uL11 [Euglena gracilis] diamond 204 128 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
28927979 28927979 PRJEB28062_P_NODE_104688_length_301_cov_1.907895_g102325_i0 PRJEB28062 104688 301 1.907895 5.74276395 Euglena gracilis 3039 Euglenozoa other_Eukaryota 80.5 4.48e-17   NR QLA09634.1 3039 g102325 i0 84.4 0.448504983388704 45 7 44.9 0 279 145 51 95 QLA09634.1 60S large subunit ribosomal protein eL33 [Euglena gracilis] diamond 135 80.5 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
29559381 29559381 PRJEB28062_P_NODE_46910_length_524_cov_7.388027_g44566_i0 PRJEB28062 46910 524 7.388027 38.71326148 Bodo saltans 75058 Euglenozoa other_Eukaryota 50.1 0.00156   NR CUE91196.1 75058 g44566 i0 41.3 0.360687022900763 63 37 36.1 0 511 323 593 655 CUE91196.1 Hypothetical protein, putative [Bodo saltans] diamond 189 50.1 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
29653865 29653865 PRJEB28062_P_NODE_92530_length_337_cov_3.064394_g90168_i0 PRJEB28062 92530 337 3.064394 10.32700778 Euglena gracilis 3039 Euglenozoa other_Eukaryota 147 5.229999999999998e-43   NR QLA09633.1 3039 g90168 i0 76 0.85459940652819 96 23 85.5 0 314 27 44 139 QLA09633.1 60S large subunit ribosomal protein eL32 [Euglena gracilis] diamond 288 147 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
29970010 29970010 PRJEB28062_P_NODE_96591_length_325_cov_2.670635_g94229_i0 PRJEB28062 96591 325 2.670635 8.67956375 Euglena gracilis 3039 Euglenozoa other_Eukaryota 163 4.1100000000000004e-49   NR QLA09612.1 3039 g94229 i0 81.9 0.867692307692308 94 17 86.8 0 319 38 70 163 QLA09612.1 60S large subunit ribosomal protein uL22 [Euglena gracilis] diamond 282 163 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
30381146 30381146 PRJEB28062_P_NODE_116333_length_269_cov_7.908163_g113970_i0 PRJEB28062 116333 269 7.908163 21.27295847 Trypanosoma vivax 5699 Euglenozoa other_Eukaryota 50.1 1.31e-4   NR KAH8605757.1 5699 g113970 i0 34.1 0.91449814126394 82 50 89.2 2 30 269 396 475 KAH8605757.1 Protein kinase domain [Trypanosoma vivax] diamond 246 50.1 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma vivax
32429613 32429613 PRJEB28062_P_NODE_121419_length_257_cov_2.260870_g119055_i0 PRJEB28062 121419 257 2.26087 5.8104359 Trypanosoma 5690 Euglenozoa other_Eukaryota 55.5 1.32e-6   NR XP_067082035.1 5694 g119055 i0 49 1.14396887159533 49 25 57.2 0 15 161 277 325 XP_067082035.1 NADH-cytochrome b5 reductase, putative [Trypanosoma equiperdum] diamond 294 55.8 0.99462365591397806 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma equiperdum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;