RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJEB27957" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 8 ✖

bioproject 1

  • PRJEB27957 · 8 ✖

analysis 1

  • diamond · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27191095 27191095 PRJEB27957_P_NODE_119162_length_164_cov_0.904348_g119052_i0 PRJEB27957 119162 164 0.904348 1.48313072 Zebrafish rhabdo-like virus RQ15 Viruses Viruses 69.3 5.34e-12   NR YP_009361866.1 RQ15 g119052 i0 51.9 0.951219512195122 52 25 95.1 0 1 156 250 301 YP_009361866.1 polyprotein [Salmovirus WFRC1] diamond 156 69.3 1 Viruses               Zebrafish rhabdo-like virus
27696961 27696961 PRJEB27957_P_NODE_116544_length_165_cov_0.896552_g116434_i0 PRJEB27957 116544 165 0.896552 1.4793108 Betachrysovirus aspergilli 2164061 Viruses Viruses 66.2 6.51e-11   NR YP_010088028.1 2164061 g116434 i0 62 0.909090909090909 50 19 90.9 0 15 164 248 297 YP_010088028.1 RNA-dependent RNA polymerase [Betachrysovirus aspergilli] diamond 150 66.2 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Chrysoviridae Betachrysovirus Betachrysovirus aspergilli
29837106 29837106 PRJEB27957_P_NODE_107111_length_168_cov_0.873950_g107001_i0 PRJEB27957 107111 168 0.87395 1.468236 Umbravirus 39734 Viruses Viruses 51.2 1.35e-5   NR QKW91260.1 2231771 g107001 i0 47.2 3.78571428571429 53 28 94.6 0 3 161 82 134 QKW91260.1 replication associated protein [Sclerotinia sclerotiorum umbra-like virus 3] diamond 636 51.2 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae Umbravirus Sclerotinia sclerotiorum umbra-like virus 3
30033298 30033298 PRJEB27957_P_NODE_94191_length_177_cov_1.382812_g94081_i0 PRJEB27957 94191 177 1.382812 2.44757724 Riboviria sp. 2585031 Viruses Viruses 75.5 4.21e-14   NR QDH86582.1 2585031 g94081 i0 72 0.847457627118644 50 14 84.7 0 26 175 256 305 QDH86582.1 MAG: RNA-dependent RNA polymerase [Riboviria sp.] diamond 150 75.5 1 Viruses               Riboviria sp.
30444072 30444072 PRJEB27957_P_NODE_82333_length_189_cov_1.485714_g82223_i0 PRJEB27957 82333 189 1.485714 2.80799946 Caudoviricetes sp. 2832643 Viruses Viruses 41.2 0.00818   NR DAP79479.1 2832643 g82223 i0 53.8 0.412698412698413 26 12 41.3 0 4 81 3 28 DAP79479.1 MAG TPA: hypothetical protein [Caudoviricetes sp.] diamond 78 41.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
31075960 31075960 PRJEB27957_P_NODE_108975_length_167_cov_0.881356_g108865_i0 PRJEB27957 108975 167 0.881356 1.47186452 Grapevine wood holobiome associated narna-like virus 6 3398663 Viruses Viruses 45.8 0.00105   NR XOD45342.1 3398663 g108865 i0 38.9 0.970059880239521 54 33 97 0 3 164 144 197 XOD45342.1 HP2 [Grapevine wood holobiome associated narna-like virus 6] diamond 162 45.8 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Grapevine wood holobiome associated narna-like virus 6
31107309 31107309 PRJEB27957_P_NODE_3795_length_591_cov_1.680812_g3698_i0 PRJEB27957 3795 591 1.680812 9.93359892 Erythrocytic necrosis virus 1543320 Viruses Viruses 177 6.14e-52   NR QCF47454.1 1543320 g3698 i0 43.6 1.98477157360406 195 110 99 0 2 586 8 202 QCF47454.1 hypothetical protein, partial [Erythrocytic necrosis virus] diamond 1173 177 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
31550367 31550367 PRJEB27957_P_NODE_106196_length_168_cov_0.873950_g106086_i0 PRJEB27957 106196 168 0.87395 1.468236 Riboviria sp. 2585031 Viruses Viruses 95.1 4.72e-21   NR WKV33284.1 2585031 g106086 i0 85.5 0.982142857142857 55 8 98.2 0 166 2 68 122 WKV33284.1 MAG: RNA-dependent RNA polymerase, partial [Riboviria sp.] diamond 165 95.1 1 Viruses               Riboviria sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;