RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB27957" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB27957 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26716211 26716211 PRJEB27957_P_NODE_108201_length_167_cov_1.762712_g108091_i0 PRJEB27957 108201 167 1.762712 2.94372904 Actinostola sp. cb2 3060491 Cnidaria other_Eukaryota 42.7 0.0134   NR KAK3705766.1 3060491 g108091 i0 64.3 1.0059880239521 28 10 50.3 0 166 83 457 484 KAK3705766.1 hypothetical protein QZH41_000593 [Actinostola sp. cb2023] diamond 168 42.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actinostolidae Actinostola Actinostola sp. cb2023
30349692 30349692 PRJEB27957_P_NODE_76152_length_196_cov_1.061224_g76042_i0 PRJEB27957 76152 196 1.061224 2.07999904 Paramuricea clavata 317549 Cnidaria other_Eukaryota 67.4 1.53e-11   NR CAB4044841.1 317549 g76042 i0 59.6 1.59183673469388 52 21 79.6 0 40 195 49 100 CAB4044841.1 Hypothetical predicted protein [Paramuricea clavata] diamond 312 67.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Plexauridae Paramuricea Paramuricea clavata
31992982 31992982 PRJEB27957_P_NODE_62078_length_213_cov_1.268293_g61968_i0 PRJEB27957 62078 213 1.268293 2.70146409 Stylophora pistillata 50429 Cnidaria other_Eukaryota 61.2 7.76e-9   NR PFX13441.1 50429 g61968 i0 53.2 6.11267605633803 62 27 84.5 2 34 213 413 474 PFX13441.1 putative RNA-directed DNA polymerase from transposon X-element [Stylophora pistillata] diamond 1302 61.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Stylophora Stylophora pistillata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;