RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB27957" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJEB27957 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27127597 27127597 PRJEB27957_P_NODE_74242_length_198_cov_1.046980_g74132_i0 PRJEB27957 74242 198 1.04698 2.0730204 Nitrososphaerota archaeon 2026795 Archaea Archaea 43.5 0.0114   NR MDR1992516.1 2026795 g74132 i0 44.2 0.787878787878788 52 27 75.8 1 153 4 266 317 MDR1992516.1 glucosyltransferase domain-containing protein [Nitrososphaerota archaeon] diamond 156 43.5 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
28391216 28391216 PRJEB27957_P_NODE_30566_length_280_cov_2.701299_g30456_i0 PRJEB27957 30566 280 2.701299 7.5636372 Candidatus Bathyarchaeota archaeon RBG_16_48_13 1797381 Archaea Archaea 43.1 0.0414   NR OGD46717.1 1797381 g30456 i0 33.9 0.664285714285714 62 30 63.2 2 11 187 290 343 OGD46717.1 MAG: hypothetical protein A3K70_04270 [Candidatus Bathyarchaeota archaeon RBG_16_48_13] diamond 186 43.1 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon RBG_16_48_13

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;