RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB25583" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB25583 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28896295 28896295 PRJEB25583_P_NODE_6068_length_169_cov_1.469697_g5891_i0 PRJEB25583 6068 169 1.469697 2.48378793 Paramecium sonneborni 65129 SAR_Eukaryotes SAR_Eukaryotes 96.7 7.53e-24   NR CAD8103391.1 65129 g5891 i0 90.7 1.91715976331361 54 5 95.9 0 6 167 89 142 CAD8103391.1 unnamed protein product [Paramecium sonneborni] diamond 324 96.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium sonneborni
29647357 29647357 PRJEB25583_P_NODE_7390_length_157_cov_1.291667_g7213_i0 PRJEB25583 7390 157 1.291667 2.02791719 Tetrahymenidae 291294 SAR_Eukaryotes SAR_Eukaryotes 94.4 4.2e-22   NR XP_004037237.1 5932 g7213 i0 86.5 7.94904458598726 52 7 99.4 0 157 2 158 209 XP_004037237.1 hypothetical protein IMG5_058070 [Ichthyophthirius multifiliis] diamond 1248 94.4 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;