RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJEB2368" and tax_phylum = "Microsporidia"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB2368 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27910948 27910948 PRJEB2368_P_NODE_10425_length_287_cov_1.216000_g10107_i0 PRJEB2368 10425 287 1.216 3.48992 Enterocytozoonidae 27970 Fungi Fungi 43.1 0.0276   NR OQS54364.1 646526 g10107 i0 83.3 0.501742160278746 24 4 25.1 0 284 213 13 36 OQS54364.1 Rpl17 [Enterocytozoon hepatopenaei] diamond 144 43.1 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
28864774 28864774 PRJEB2368_P_NODE_12868_length_192_cov_2.445161_g12549_i0 PRJEB2368 12868 192 2.445161 4.69470912 Enterospora canceri 1081671 Fungi Fungi 102 2.6e-26   NR ORD94087.1 1081671 g12549 i0 74.6 0.984375 63 16 98.4 0 3 191 12 74 ORD94087.1 RL30 [Enterospora canceri] diamond 189 102 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Enterospora Enterospora canceri
28991454 28991454 PRJEB2368_P_NODE_7748_length_287_cov_1.884000_g7430_i0 PRJEB2368 7748 287 1.884 5.40708 Spraguea lophii 42_11 51541 Fungi Fungi 60.1 5.01e-8   NR EPR79078.1 1358809 g7430 i0 86.2 0.303135888501742 29 4 30.3 0 201 287 167 195 EPR79078.1 Glutaminyl-tRNA synthetase [Spraguea lophii 42_110] diamond 87 60.1 1 Eukaryota Opisthokonta Fungi Microsporidia     Spragueidae Spraguea Spraguea lophii
29717065 29717065 PRJEB2368_P_NODE_9690_length_287_cov_1.372000_g9372_i0 PRJEB2368 9690 287 1.372 3.93764 Enterocytozoon bieneusi H348 481877 Fungi Fungi 45.4 0.00655   NR EED43820.1 481877 g9372 i0 84 0.261324041811847 25 4 26.1 0 286 212 145 169 EED43820.1 hypothetical membrane spanning protein [Enterocytozoon bieneusi H348] diamond 75 45.4 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Enterocytozoon Enterocytozoon bieneusi
30633299 30633299 PRJEB2368_P_NODE_8173_length_287_cov_1.708000_g7855_i0 PRJEB2368 8173 287 1.708 4.90196 Enterospora canceri 1081671 Fungi Fungi 50.8 9.15e-5   NR ORD95157.1 1081671 g7855 i0 80 0.261324041811847 25 5 26.1 0 1 75 433 457 ORD95157.1 putative isoleucine--tRNA ligase, cytoplasmic [Enterospora canceri] diamond 75 50.8 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Enterospora Enterospora canceri
32562795 32562795 PRJEB2368_P_NODE_7859_length_287_cov_1.832000_g7541_i0 PRJEB2368 7859 287 1.832 5.25784 Enterocytozoon bieneusi H348 481877 Fungi Fungi 50.8 1.74e-5   NR EED44590.1 481877 g7541 i0 92 0.261324041811847 25 2 26.1 0 286 212 20 44 EED44590.1 SSU ribosomal protein S17E [Enterocytozoon bieneusi H348] diamond 75 50.8 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Enterocytozoon Enterocytozoon bieneusi

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;