RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJEB2368" and tax_phylum = "Elusimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Elusimicrobiota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJEB2368 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27222595 27222595 PRJEB2368_P_NODE_11183_length_285_cov_1.491935_g10864_i0 PRJEB2368 11183 285 1.491935 4.25201475 Endomicrobiaceae bacterium 2775028 Bacteria Bacteria 58.5 4.43e-8   NR MDD3923098.1 2775028 g10864 i0 100 0.263157894736842 25 0 26.3 0 1 75 108 132 MDD3923098.1 hypothetical protein [Endomicrobiaceae bacterium] diamond 75 58.5 1 Bacteria   Pseudomonadati Elusimicrobiota Endomicrobiia Endomicrobiales Endomicrobiaceae   Endomicrobiaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;