RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB2368" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB2368 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23938710 23938710 PRJEB2368_P_NODE_5779_length_319_cov_1.524823_g5461_i0 PRJEB2368 5779 319 1.524823 4.86418537 Thelohanellus kitauei 669202 Cnidaria other_Eukaryota 112 1.63e-26   NR YP_011052057.1 669202 g5461 i0 61.5 0.733542319749216 78 30 73.4 0 86 319 190 267 YP_011052057.1 cytochrome c oxidase subunit I [Thelohanellus kitauei] diamond 234 112 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Thelohanellus Thelohanellus kitauei
32681800 32681800 PRJEB2368_P_NODE_15520_length_154_cov_1.000000_g15201_i0 PRJEB2368 15520 154 1 1.54 root 1 Root_unresolved Root_unresolved 45.1 0.00172   NR XP_022809421.1 50429 g15201 i0 56.3 3.11688311688312 32 14 62.3 0 100 5 349 380 XP_022809421.1 uncharacterized protein LOC111346397 [Stylophora pistillata] diamond 480 45.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Stylophora Stylophora pistillata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;