RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJEB2368" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJEB2368 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28991451 28991451 PRJEB2368_P_NODE_10328_length_287_cov_1.248000_g10010_i0 PRJEB2368 10328 287 1.248 3.58176 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 46.6 0.00105   NR MDB5260412.1 2052152 g10010 i0 84 0.261324041811847 25 4 26.1 0 213 287 29 53 MDB5260412.1 Glyoxalase/bleomycin resistance protein/dioxygenase [Candidatus Nomurabacteria bacterium] diamond 75 46.6 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
29306803 29306803 PRJEB2368_P_NODE_8809_length_287_cov_1.516000_g8491_i0 PRJEB2368 8809 287 1.516 4.35092 Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_ 2052152 Bacteria Bacteria 48.9 4.21e-4   NR OGI64422.1 1801738 g8491 i0 31.6 0.993031358885017 95 19 99.3 1 285 1 276 324 OGI64422.1 MAG: hypothetical protein A2733_01285 [Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_40_20] diamond 285 48.9 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_40_20
31834625 31834625 PRJEB2368_P_NODE_7957_length_287_cov_1.792000_g7639_i0 PRJEB2368 7957 287 1.792 5.14304 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 45.1 0.00926   NR MCC6290563.1 2052152 g7639 i0 72 0.261324041811847 25 7 26.1 0 76 2 194 218 MCC6290563.1 recombinase family protein [Candidatus Nomurabacteria bacterium] diamond 75 45.1 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
32751461 32751461 PRJEB2368_P_NODE_10560_length_287_cov_1.136000_g10242_i0 PRJEB2368 10560 287 1.136 3.26032 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 48.5 3.57e-4   NR MCC6520574.1 2052152 g10242 i0 96 0.261324041811847 25 1 26.1 0 3 77 100 124 MCC6520574.1 hypothetical protein [Candidatus Nomurabacteria bacterium] diamond 75 48.5 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;