RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB2368" and tax_phylum = "Ascomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB2368 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29590685 29590685 PRJEB2368_P_NODE_1210_length_790_cov_3.034529_g993_i0 PRJEB2368 1210 790 3.034529 23.9727791 Diploschistes diacapsis 150877 Fungi Fungi 64.7 7.95e-8   NR KAI4142025.1 150877 g993 i0 31.6 1.51518987341772 136 85 51.3 3 782 378 98 226 KAI4142025.1 MAG: hypothetical protein LQ340_007455 [Diploschistes diacapsis] diamond 1197 64.7 1 Eukaryota Opisthokonta Fungi Ascomycota Lecanoromycetes Ostropales Graphidaceae Diploschistes Diploschistes diacapsis
31455316 31455316 PRJEB2368_P_NODE_14296_length_166_cov_1.713178_g13977_i0 PRJEB2368 14296 166 1.713178 2.84387548 Pyronema omphalodes CBS 1 337075 Fungi Fungi 92.8 2.33e-20   NR CCX05784.1 1076935 g13977 i0 71.2 4.69879518072289 52 15 94 0 1 156 242 293 CCX05784.1 Similar to Exoglucanase 1; acc. no. P13860 [Pyronema omphalodes CBS 100304] diamond 780 92.8 1 Eukaryota Opisthokonta Fungi Ascomycota Pezizomycetes Pezizales Pyronemataceae Pyronema Pyronema omphalodes

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;