RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB2368" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB2368 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26621596 26621596 PRJEB2368_P_NODE_9201_length_287_cov_1.444000_g8883_i0 PRJEB2368 9201 287 1.444 4.14428 Trichonephila clavipes 2585209 Arthropoda Arthropoda 46.6 0.00281   NR GFX23991.1 2585209 g8883 i0 64 4.44250871080139 25 9 26.1 0 76 2 390 414 GFX23991.1 retrovirus-related Pol polyprotein from transposon 412 [Trichonephila clavipes] diamond 1275 46.6 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Araneae Nephilidae Trichonephila Trichonephila clavipes
30159303 30159303 PRJEB2368_P_NODE_4792_length_353_cov_1.962025_g4477_i0 PRJEB2368 4792 353 1.962025 6.92594825 Meganyctiphanes norvegica 48144 Arthropoda Arthropoda 45.1 0.0181   NR CAL4114082.1 48144 g4477 i0 40.9 0.373937677053824 44 26 37.4 0 76 207 71 114 CAL4114082.1 unnamed protein product [Meganyctiphanes norvegica] diamond 132 45.1 1 Eukaryota Opisthokonta Metazoa Arthropoda Malacostraca Euphausiacea Euphausiidae Meganyctiphanes Meganyctiphanes norvegica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;