contig_metadata
10 rows where analysis = "diamond", bioproject = "PRJEB20058" and tax_phylum = "Rhodothermota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26062674 | 26062674 | PRJEB20058_P_NODE_234949_length_226_cov_2.454545_g232124_i0 | PRJEB20058 | 234949 | 226 | 2.454545 | 5.5472717 | Rubricoccaceae bacterium | 2838334 | Bacteria | Bacteria | 130 | 4.21e-36 | NR | HEX8386404.1 | 2838334 | g232124 | i0 | 91.2 | 0.902654867256637 | 68 | 6 | 90.3 | 0 | 2 | 205 | 13 | 80 | HEX8386404.1 carbonic anhydrase family protein [Rubricoccaceae bacterium] | diamond | 204 | 130 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubricoccaceae bacterium | ||
| 26203082 | 26203082 | PRJEB20058_P_NODE_91982_length_428_cov_1.043597_g89183_i0 | PRJEB20058 | 91982 | 428 | 1.043597 | 4.46659516 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 216 | 1.2299999999999998e-66 | NR | HEX9952106.1 | 2838334 | g89183 | i0 | 85.7 | 1.69626168224299 | 119 | 17 | 83.4 | 0 | 72 | 428 | 3 | 121 | HEX9952106.1 NADH:flavin oxidoreductase [Rubricoccaceae bacterium] | diamond | 726 | 217 | 0.995391705069124 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubricoccaceae bacterium | ||
| 26336714 | 26336714 | PRJEB20058_P_NODE_50639_length_591_cov_1.609434_g47910_i0 | PRJEB20058 | 50639 | 591 | 1.609434 | 9.51175494 | Rubricoccaceae bacterium | 2838334 | Bacteria | Bacteria | 355 | 2.96e-117 | NR | HEX8385862.1 | 2838334 | g47910 | i0 | 90.5 | 1.01015228426396 | 199 | 10 | 96.4 | 1 | 3 | 572 | 40 | 238 | HEX8385862.1 aspartate--tRNA ligase [Rubricoccaceae bacterium] | diamond | 597 | 355 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubricoccaceae bacterium | ||
| 26471068 | 26471068 | PRJEB20058_P_NODE_23496_length_859_cov_2.340852_g21295_i0 | PRJEB20058 | 23496 | 859 | 2.340852 | 20.10791868 | Rubricoccaceae bacterium | 2838334 | Bacteria | Bacteria | 454 | 3.43e-155 | NR | HEX8386403.1 | 2838334 | g21295 | i0 | 81.5 | 0.9988358556461 | 286 | 53 | 99.9 | 0 | 2 | 859 | 236 | 521 | HEX8386403.1 SulP family inorganic anion transporter [Rubricoccaceae bacterium] | diamond | 858 | 454 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubricoccaceae bacterium | ||
| 32996433 | 32996433 | PRJEB20058_P_NODE_199395_length_257_cov_0.908163_g196571_i0 | PRJEB20058 | 199395 | 257 | 0.908163 | 2.33397891 | Rubricoccaceae bacterium | 2838334 | Bacteria | Bacteria | 67.4 | 3.59e-11 | NR | HEX8299034.1 | 2838334 | g196571 | i0 | 79.5 | 0.910505836575875 | 39 | 8 | 45.5 | 0 | 139 | 255 | 1 | 39 | HEX8299034.1 RecX family transcriptional regulator [Rubricoccaceae bacterium] | diamond | 234 | 67.4 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubricoccaceae bacterium | ||
| 33013664 | 33013664 | PRJEB20058_P_NODE_23484_length_859_cov_6.349624_g21283_i0 | PRJEB20058 | 23484 | 859 | 6.349624 | 54.54327016 | Rhodothermus marinus | 29549 | Bacteria | Bacteria | 293 | 1.59e-86 | NR | WP_144295528.1 | 29549 | g21283 | i0 | 59.3 | 0.883585564610012 | 253 | 87 | 83.5 | 2 | 8 | 724 | 939 | 1189 | WP_144295528.1 AVAST type 2 anti-phage system protein Avs2 [Rhodothermus marinus] | diamond | 759 | 293 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rhodothermaceae | Rhodothermus | Rhodothermus marinus | |
| 33042374 | 33042374 | PRJEB20058_P_NODE_11948_length_1201_cov_1.747368_g10345_i0 | PRJEB20058 | 11948 | 1201 | 1.747368 | 20.98588968 | FCB group | 1783270 | Bacteria | Bacteria | 270 | 5.03e-83 | NR | HUF08622.1 | 2306054 | g10345 | i0 | 61.3 | 1.06161532056619 | 212 | 82 | 53 | 0 | 728 | 93 | 201 | 412 | HUF08622.1 ABC transporter substrate-binding protein [Rhodothermales bacterium] | diamond | 1275 | 271 | 0.996309963099631 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rhodothermales bacterium | |||
| 33099396 | 33099396 | PRJEB20058_P_NODE_86446_length_443_cov_5.086387_g83657_i0 | PRJEB20058 | 86446 | 443 | 5.086387 | 22.53269441 | Rhodothermales bacterium | 2306054 | Bacteria | Bacteria | 192 | 5.17e-60 | NR | MEP0547605.1 | 2306054 | g83657 | i0 | 71.9 | 1.82844243792325 | 135 | 38 | 91.4 | 0 | 425 | 21 | 1 | 135 | MEP0547605.1 hypothetical protein [Rhodothermales bacterium] | diamond | 810 | 192 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rhodothermales bacterium | |||
| 33127726 | 33127726 | PRJEB20058_P_NODE_164247_length_294_cov_10.510730_g161424_i0 | PRJEB20058 | 164247 | 294 | 10.51073 | 30.9015462 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 124 | 6.78e-33 | NR | WP_094545395.1 | 716817 | g161424 | i0 | 75 | 14.734693877551 | 76 | 19 | 77.6 | 0 | 14 | 241 | 169 | 244 | WP_094545395.1 RadC family protein [Rubricoccus marinus] | diamond | 4332 | 124 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubricoccus | Rubricoccus marinus | |
| 33167520 | 33167520 | PRJEB20058_P_NODE_76880_length_473_cov_5.652913_g74100_i0 | PRJEB20058 | 76880 | 473 | 5.652913 | 26.73827849 | Rubricoccaceae bacterium | 2838334 | Bacteria | Bacteria | 236 | 6.979999999999999e-72 | NR | HEX8384786.1 | 2838334 | g74100 | i0 | 86 | 1.90274841437632 | 150 | 21 | 95.1 | 0 | 452 | 3 | 294 | 443 | HEX8384786.1 ATP-binding protein [Rubricoccaceae bacterium] | diamond | 900 | 236 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubricoccaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;