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contig_metadata

8,701 rows where analysis = "diamond", bioproject = "PRJEB20058" and tax_phylum = "Pseudomonadota"

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tax_superkingdom 1

tax_phylum 1

  • Pseudomonadota · 8,701 ✖

tax_kingdom 1

bioproject 1

  • PRJEB20058 · 8,701 ✖

analysis 1

  • diamond · 8,701 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22685 22685 PRJEB20058_S_NODE_2161_length_464_cov_1.846154_g2123_i0 PRJEB20058 2161 464 1.846154 8.56615456 Acidovorax sp. 1872122 Bacteria Bacteria 234 9.26e-75   NR WP_409882466.1 1872122 g2123 i0 90.6 0.898706896551724 139 13 89.9 0 3 419 132 270 WP_409882466.1 AraC family transcriptional regulator [Acidovorax sp.] diamond 417 234 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax Acidovorax sp.
22697 22697 PRJEB20058_S_NODE_2701_length_406_cov_8.968116_g2663_i0 PRJEB20058 2701 406 8.968116 36.41055096 Psychromonas sp. B3M 1884585 Bacteria Bacteria 231 4.68e-74   NR WP_113818187.1 2267226 g2663 i0 91.3 0.938423645320197 127 11 93.8 0 22 402 78 204 WP_113818187.1 class I SAM-dependent methyltransferase [Psychromonas sp. B3M02] diamond 381 231 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Alteromonadales Psychromonadaceae Psychromonas Psychromonas sp. B3M02
22701 22701 PRJEB20058_S_NODE_2781_length_400_cov_1.725664_g2743_i0 PRJEB20058 2781 400 1.725664 6.902656 Phyllobacterium myrsinacearum 28101 Bacteria Bacteria 255 1.0299999999999999e-81   NR WP_130272243.1 28101 g2743 i0 100 0.9975 133 0 99.8 0 400 2 23 155 WP_130272243.1 D-alanyl-D-alanine carboxypeptidase [Phyllobacterium myrsinacearum] diamond 399 255 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium myrsinacearum
22743 22743 PRJEB20058_S_NODE_4521_length_294_cov_6.051502_g4483_i0 PRJEB20058 4521 294 6.051502 17.79141588 Caulobacter sp. CCUG 6 78 Bacteria Bacteria 97.4 4.13e-21   NR WP_242919220.1 2100090 g4483 i0 100 0.469387755102041 46 0 46.9 0 23 160 677 722 WP_242919220.1 hybrid sensor histidine kinase/response regulator [Caulobacter sp. CCUG 60055] diamond 138 97.4 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter sp. CCUG 60055
22764 22764 PRJEB20058_S_NODE_5281_length_265_cov_1.372549_g5243_i0 PRJEB20058 5281 265 1.372549 3.63725485 Sphingomonas sp. 1F27F7B 2502186 Bacteria Bacteria 97.1 3.75e-21   NR WP_171015307.1 2502186 g5243 i0 97.8 0.509433962264151 45 1 50.9 0 3 137 613 657 WP_171015307.1 FkbM family methyltransferase [Sphingomonas sp. 1F27F7B] diamond 135 97.1 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp. 1F27F7B
985876 985876 PRJEB20058_S_NODE_1361_length_586_cov_2.417143_g1323_i0 PRJEB20058 1361 586 2.417143 14.16445798 Pelomicrobium methylotrophicum 2602750 Bacteria Bacteria 374 6.34e-126   NR WP_147800191.1 2602750 g1323 i0 99.5 0.993174061433447 194 1 99.3 0 3 584 97 290 WP_147800191.1 NADH-quinone oxidoreductase subunit M [Pelomicrobium methylotrophicum] diamond 582 374 1 Bacteria   Pseudomonadati Pseudomonadota Hydrogenophilia     Pelomicrobium Pelomicrobium methylotrophicum
1296954 1296954 PRJEB20058_S_NODE_4682_length_288_cov_0.982379_g4644_i0 PRJEB20058 4682 288 0.982379 2.82925152 Caulobacter sp. CCUG 6 78 Bacteria Bacteria 198 8.32e-61   NR WP_242922101.1 2100090 g4644 i0 97.9 1 96 2 100 0 288 1 248 343 WP_242922101.1 dipeptide epimerase [Caulobacter sp. CCUG 60055] diamond 288 198 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter sp. CCUG 60055
1297033 1297033 PRJEB20058_S_NODE_7702_length_201_cov_0.914286_g7664_i0 PRJEB20058 7702 201 0.914286 1.83771486 Caulobacter sp. CCUG 6 78 Bacteria Bacteria 130 6.979999999999998e-35   NR WP_242922266.1 2100090 g7664 i0 98.4 0.940298507462687 63 1 94 0 11 199 92 154 WP_242922266.1 XdhC family protein [Caulobacter sp. CCUG 60055] diamond 189 130 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter sp. CCUG 60055
2572572 2572572 PRJEB20058_S_NODE_2583_length_418_cov_1.434174_g2545_i0 PRJEB20058 2583 418 1.434174 5.99484732 Phyllobacterium sp. OV277 1882772 Bacteria Bacteria 229 5.02e-73   NR WP_091885244.1 1882772 g2545 i0 89.4 0.882775119617225 123 13 88.3 0 48 416 1 123 WP_091885244.1 nitrate ABC transporter permease [Phyllobacterium sp. OV277] diamond 369 229 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium sp. OV277
2572621 2572621 PRJEB20058_S_NODE_43_length_2043_cov_4.380424_g41_i0 PRJEB20058 43 2043 4.380424 89.49206232 Rhizobiaceae 82115 Bacteria Bacteria 550 4.96e-190   NR WP_306412901.1 2965071 g41 i0 83 2.40528634361233 329 56 48.3 0 163 1149 1 329 WP_306412901.1 CobW family GTP-binding protein [Ectorhizobium quercum] diamond 4914 550 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Rhizobiaceae Ectorhizobium Ectorhizobium quercum
2572655 2572655 PRJEB20058_S_NODE_5703_length_251_cov_1.010526_g5665_i0 PRJEB20058 5703 251 1.010526 2.53642026 Phyllobacterium myrsinacearum 28101 Bacteria Bacteria 164 3.38e-46   NR WP_182550842.1 28101 g5665 i0 95.2 0.99203187250996006 83 4 99.2 0 251 3 159 241 WP_182550842.1 sensor domain-containing diguanylate cyclase [Phyllobacterium myrsinacearum] diamond 249 164 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium myrsinacearum
2572657 2572657 PRJEB20058_S_NODE_5823_length_247_cov_1.741935_g5785_i0 PRJEB20058 5823 247 1.741935 4.30257945 Caulobacter sp. CCUG 6 78 Bacteria Bacteria 162 3.39e-44   NR WP_242921633.1 2100090 g5785 i0 100 0.959514170040486 79 0 96 0 11 247 787 865 WP_242921633.1 TonB-dependent receptor [Caulobacter sp. CCUG 60055] diamond 237 162 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter sp. CCUG 60055
3848859 3848859 PRJEB20058_S_NODE_1424_length_572_cov_2.481409_g1386_i0 PRJEB20058 1424 572 2.481409 14.19365948 Curvibacter sp. 1888168 Bacteria Bacteria 85.5 1.28e-18   NR RUP35408.1 1888168 g1386 i0 92.7 0.215034965034965 41 3 21.5 0 137 15 1 41 RUP35408.1 MAG: cold-shock protein [Curvibacter sp.] diamond 123 85.5 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Curvibacter Curvibacter sp.
3848873 3848873 PRJEB20058_S_NODE_1924_length_491_cov_2.472093_g1886_i0 PRJEB20058 1924 491 2.472093 12.13797663 Brucella/Ochrobactrum group 2826938 Bacteria Bacteria 289 1.45e-97   NR WP_148101603.1 2826938 g1886 i0 100 0.995926680244399 163 0 99.6 0 490 2 6 168 WP_148101603.1 MULTISPECIES: SulP family inorganic anion transporter, partial [Brucella/Ochrobactrum group] diamond 489 289 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Brucellaceae    
3848891 3848891 PRJEB20058_S_NODE_2464_length_431_cov_3.154054_g2426_i0 PRJEB20058 2464 431 3.154054 13.59397274 Phyllobacterium sp. 1871046 Bacteria Bacteria 176 1.88e-50   NR MBN9137490.1 1871046 g2426 i0 95.9 0.682134570765661 98 4 68.2 0 25 318 327 424 MBN9137490.1 class I tRNA ligase family protein [Phyllobacterium sp.] diamond 294 176 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium sp.
3848985 3848985 PRJEB20058_S_NODE_6104_length_239_cov_1.337079_g6066_i0 PRJEB20058 6104 239 1.337079 3.19561881 Acidovorax sp. 1872122 Bacteria Bacteria 139 1.09e-36   NR MBP7544858.1 1872122 g6066 i0 87.3 4.9581589958159 79 10 99.2 0 2 238 51 129 MBP7544858.1 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB [Acidovorax sp.] diamond 1185 139 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax Acidovorax sp.
3848992 3848992 PRJEB20058_S_NODE_6424_length_229_cov_1.809524_g6386_i0 PRJEB20058 6424 229 1.809524 4.14380996 Curvibacter sp. 1888168 Bacteria Bacteria 149 1.2899999999999999e-39   NR RUP35407.1 1888168 g6386 i0 95.9 0.96943231441048 74 3 96.9 0 1 222 748 821 RUP35407.1 MAG: DNA repair protein [Curvibacter sp.] diamond 222 149 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Curvibacter Curvibacter sp.
3849030 3849030 PRJEB20058_S_NODE_784_length_753_cov_3.053468_g753_i0 PRJEB20058 784 753 3.053468 22.99261404 Caulobacter sp. CCUG 6 78 Bacteria Bacteria 468 1.02e-158   NR WP_242923608.1 2100090 g753 i0 99.2 0.940239043824701 236 2 94 0 744 37 229 464 WP_242923608.1 TonB-dependent receptor [Caulobacter sp. CCUG 60055] diamond 708 468 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter sp. CCUG 60055
4813749 4813749 PRJEB20058_S_NODE_3464_length_354_cov_1.440273_g3426_i0 PRJEB20058 3464 354 1.440273 5.09856642 Caulobacter sp. CCUG 6 78 Bacteria Bacteria 223 1.07e-71   NR WP_242917704.1 2100090 g3426 i0 99.1 0.983050847457627 116 1 98.3 0 349 2 15 130 WP_242917704.1 helix-turn-helix domain-containing protein [Caulobacter sp. CCUG 60055] diamond 348 223 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter sp. CCUG 60055
5125073 5125073 PRJEB20058_S_NODE_1245_length_617_cov_8.091727_g1207_i0 PRJEB20058 1245 617 8.091727 49.92595559 Caulobacter sp. CCUG 6 78 Bacteria Bacteria 226 2.1799999999999997e-72   NR WP_242919044.1 2100090 g1207 i0 99.2 0.573743922204214 118 1 57.4 0 20 373 49 166 WP_242919044.1 LPS assembly lipoprotein LptE [Caulobacter sp. CCUG 60055] diamond 354 226 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter sp. CCUG 60055
5125155 5125155 PRJEB20058_S_NODE_465_length_937_cov_3.305936_g449_i0 PRJEB20058 465 937 3.305936 30.97662032 Phyllobacterium myrsinacearum 28101 Bacteria Bacteria 334 6.229999999999998e-112   NR PRD52444.1 28101 g449 i0 97.1 1.11419423692636 174 5 55.7 0 918 397 69 242 PRD52444.1 DedA family protein [Phyllobacterium myrsinacearum] diamond 1044 334 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium myrsinacearum
5125193 5125193 PRJEB20058_S_NODE_605_length_839_cov_2.340617_g584_i0 PRJEB20058 605 839 2.340617 19.63777663 Caulobacter sp. CCUG 6 78 Bacteria Bacteria 316 3.7e-100   NR WP_242920858.1 2100090 g584 i0 100 0.582836710369487 163 0 58.3 0 837 349 471 633 WP_242920858.1 monovalent cation:proton antiporter-2 (CPA2) family protein [Caulobacter sp. CCUG 60055] diamond 489 316 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter sp. CCUG 60055
6089024 6089024 PRJEB20058_S_NODE_3105_length_377_cov_3.867089_g3067_i0 PRJEB20058 3105 377 3.867089 14.57892553 Caulobacter sp. CCUG 6 78 Bacteria Bacteria 212 1.4999999999999998e-67   NR WP_242919238.1 2100090 g3067 i0 100 0.883289124668435 111 0 88.3 0 22 354 79 189 WP_242919238.1 sigma-70 family RNA polymerase sigma factor [Caulobacter sp. CCUG 60055] diamond 333 212 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter sp. CCUG 60055
6400791 6400791 PRJEB20058_S_NODE_1006_length_679_cov_1.639159_g970_i0 PRJEB20058 1006 679 1.639159 11.12988961 Acidovorax sp. 1872122 Bacteria Bacteria 346 1.39e-114   NR WP_409833257.1 1872122 g970 i0 78.8 1.99705449189985 226 48 99.9 0 2 679 129 354 WP_409833257.1 alanine/glycine:cation symporter family protein [Acidovorax sp.] diamond 1356 346 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax Acidovorax sp.
6400879 6400879 PRJEB20058_S_NODE_46_length_1977_cov_13.453549_g44_i0 PRJEB20058 46 1977 13.453549 265.97666373 unclassified Sphingomonas 196159 Bacteria Bacteria 613 1.6699999999999993e-215   NR WP_137862401.1 196159 g44 i0 99 0.474962063732929 313 3 47.5 0 407 1345 1 313 WP_137862401.1 MULTISPECIES: transketolase family protein [unclassified Sphingomonas] diamond 939 613 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas  
6400901 6400901 PRJEB20058_S_NODE_566_length_861_cov_2.781250_g548_i0 PRJEB20058 566 861 2.78125 23.9465625 Hydrogenophaga sp. 1904254 Bacteria Bacteria 264 3.94e-83   NR WP_305727258.1 1904254 g548 i0 85.7 0.560975609756098 161 23 56.1 0 1 483 206 366 WP_305727258.1 ParB/RepB/Spo0J family partition protein [Hydrogenophaga sp.] diamond 483 264 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Hydrogenophaga Hydrogenophaga sp.
6400962 6400962 PRJEB20058_S_NODE_906_length_712_cov_11.391705_g871_i0 PRJEB20058 906 712 11.391705 81.1089396 Neisseria oralis 1107316 Bacteria Bacteria 382 7.01e-131   NR WP_308025257.1 1107316 g871 i0 100 0.817415730337079 194 0 81.7 0 605 24 125 318 WP_308025257.1 hypothetical protein, partial [Neisseria oralis] diamond 582 382 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria Neisseria oralis
7674934 7674934 PRJEB20058_S_NODE_127_length_1460_cov_2.604003_g123_i0 PRJEB20058 127 1460 2.604003 38.0184438 unclassified Variovorax 663243 Bacteria Bacteria 429 5.919999999999998e-147   NR WP_164546978.1 663243 g123 i0 100 0.466438356164384 227 0 46.6 0 387 1067 1 227 WP_164546978.1 MULTISPECIES: ABC transporter ATP-binding protein [unclassified Variovorax] diamond 681 429 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Variovorax  
8639008 8639008 PRJEB20058_S_NODE_3287_length_363_cov_7.503311_g3249_i0 PRJEB20058 3287 363 7.503311 27.23701893 Phyllobacterium sp. 628 2718938 Bacteria Bacteria 120 1.13e-30   NR WP_188342272.1 2718938 g3249 i0 87.1 1.53719008264463 62 8 51.2 0 21 206 215 276 WP_188342272.1 MBL fold metallo-hydrolase [Phyllobacterium sp. 628] diamond 558 120 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium sp. 628
8949670 8949670 PRJEB20058_S_NODE_1008_length_678_cov_2.223663_g972_i0 PRJEB20058 1008 678 2.223663 15.07643514 unclassified Bradyrhizobium 2631580 Bacteria Bacteria 226 1.12e-69   NR WP_211963010.1 2631580 g972 i0 96.4 0.495575221238938 112 3 49.1 1 346 678 35 146 WP_211963010.1 MULTISPECIES: alpha/beta hydrolase family protein [unclassified Bradyrhizobium] diamond 336 226 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
8949762 8949762 PRJEB20058_S_NODE_5148_length_269_cov_1.413462_g5110_i0 PRJEB20058 5148 269 1.413462 3.80221278 Phyllobacterium sp. 1871046 Bacteria Bacteria 171 7.11e-51   NR MBN9137169.1 1871046 g5110 i0 97.8 0.992565055762082 89 2 99.3 0 269 3 197 285 MBN9137169.1 sensor domain-containing diguanylate cyclase [Phyllobacterium sp.] diamond 267 171 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium sp.
8949778 8949778 PRJEB20058_S_NODE_5688_length_251_cov_1.994737_g5650_i0 PRJEB20058 5688 251 1.994737 5.00678987 Phyllobacterium 28100 Bacteria Bacteria 162 5.22e-49   NR MBN9137168.1 1871046 g5650 i0 100 1.9840637450199201 83 0 99.2 0 3 251 71 153 MBN9137168.1 amino acid ABC transporter ATP-binding protein [Phyllobacterium sp.] diamond 498 162 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium sp.
10225403 10225403 PRJEB20058_S_NODE_1089_length_655_cov_2.964646_g1052_i0 PRJEB20058 1089 655 2.964646 19.4184313 Phyllobacterium myrsinacearum 28101 Bacteria Bacteria 392 1.38e-135   NR WP_130268904.1 28101 g1052 i0 100 0.847328244274809 185 0 84.7 0 642 88 117 301 WP_130268904.1 phosphotransferase family protein [Phyllobacterium myrsinacearum] diamond 555 392 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium myrsinacearum
10225463 10225463 PRJEB20058_S_NODE_3509_length_351_cov_1.527586_g3471_i0 PRJEB20058 3509 351 1.527586 5.36182686 Thermomonas sp. 1971895 Bacteria Bacteria 229 1.45e-72   NR MBP6439098.1 1971895 g3471 i0 100 0.991452991452991 116 0 99.1 0 349 2 90 205 MBP6439098.1 LysR family transcriptional regulator [Thermomonas sp.] diamond 348 229 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Thermomonas Thermomonas sp.
10225464 10225464 PRJEB20058_S_NODE_3569_length_346_cov_2.947368_g3531_i0 PRJEB20058 3569 346 2.947368 10.19789328 Caulobacter sp. CCUG 6 78 Bacteria Bacteria 210 1.43e-62   NR WP_242920247.1 2100090 g3531 i0 100 0.988439306358382 114 0 98.8 0 345 4 96 209 WP_242920247.1 ATP-binding protein [Caulobacter sp. CCUG 60055] diamond 342 210 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter sp. CCUG 60055
11189279 11189279 PRJEB20058_S_NODE_3589_length_345_cov_1.609155_g3551_i0 PRJEB20058 3589 345 1.609155 5.55158475 unclassified Bradyrhizobium 2631580 Bacteria Bacteria 70.9 1.62e-11   NR WP_211964670.1 2631580 g3551 i0 86.1 0.939130434782609 36 5 31.3 0 343 236 609 644 WP_211964670.1 MULTISPECIES: ABC transporter ATP-binding protein [unclassified Bradyrhizobium] diamond 324 70.9 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
11500828 11500828 PRJEB20058_S_NODE_6670_length_223_cov_1.574074_g6632_i0 PRJEB20058 6670 223 1.574074 3.51018502 Phyllobacterium 28100 Bacteria Bacteria 150 2.06e-41   NR WP_182550842.1 28101 g6632 i0 98.6 2.93273542600897 73 1 98.2 0 3 221 240 312 WP_182550842.1 sensor domain-containing diguanylate cyclase [Phyllobacterium myrsinacearum] diamond 654 150 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium myrsinacearum
12776268 12776268 PRJEB20058_S_NODE_1531_length_549_cov_18.954918_g1493_i0 PRJEB20058 1531 549 18.954918 104.06249982 Caulobacter sp. CCUG 6 78 Bacteria Bacteria 226 2.16e-72   NR WP_242921933.1 2100090 g1493 i0 100 0.655737704918033 120 0 65.6 0 528 169 72 191 WP_242921933.1 PadR family transcriptional regulator [Caulobacter sp. CCUG 60055] diamond 360 226 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter sp. CCUG 60055
12776289 12776289 PRJEB20058_S_NODE_2391_length_439_cov_1.775132_g2353_i0 PRJEB20058 2391 439 1.775132 7.79282948 Pelomonas sp. CA6 2907999 Bacteria Bacteria 213 4.08e-67   NR WP_241398896.1 2907999 g2353 i0 95.7 0.792710706150342 116 5 79.3 0 90 437 1 116 WP_241398896.1 response regulator transcription factor [Pelomonas sp. CA6] diamond 348 213 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Roseateles Pelomonas sp. CA6
12776340 12776340 PRJEB20058_S_NODE_4651_length_289_cov_1.390351_g4613_i0 PRJEB20058 4651 289 1.390351 4.01811439 Brevundimonas sp. 1871086 Bacteria Bacteria 120 5.099999999999999e-33   NR WP_312205583.1 1871086 g4613 i0 98.4 0.664359861591695 64 1 66.4 0 255 64 57 120 WP_312205583.1 DUF72 domain-containing protein, partial [Brevundimonas sp.] diamond 192 120 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Brevundimonas Brevundimonas sp.
13739359 13739359 PRJEB20058_S_NODE_2711_length_405_cov_2.389535_g2673_i0 PRJEB20058 2711 405 2.389535 9.67761675 Caulobacter sp. CCUG 60055 2100090 Bacteria Bacteria 234 3.28e-73   NR MCI3181644.1 2100090 g2673 i0 99.2 0.962962962962963 130 1 96.3 0 390 1 67 196 MCI3181644.1 ABC transporter permease [Caulobacter sp. CCUG 60055] diamond 390 234 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter sp. CCUG 60055
14050812 14050812 PRJEB20058_S_NODE_1892_length_495_cov_8.758065_g1854_i0 PRJEB20058 1892 495 8.758065 43.35242175 Caulobacter sp. CCUG 6 78 Bacteria Bacteria 197 1.37e-61   NR WP_242917882.1 2100090 g1854 i0 98.1 0.624242424242424 103 2 62.4 0 165 473 1 103 WP_242917882.1 lipocalin-like domain-containing protein [Caulobacter sp. CCUG 60055] diamond 309 197 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter sp. CCUG 60055
14050834 14050834 PRJEB20058_S_NODE_2872_length_394_cov_1.921922_g2834_i0 PRJEB20058 2872 394 1.921922 7.57237268 Sphingomonas sp. 1F27F7B 2502186 Bacteria Bacteria 259 2.15e-80   NR WP_171015307.1 2502186 g2834 i0 99.2 0.99746192893401 131 1 99.7 0 2 394 482 612 WP_171015307.1 FkbM family methyltransferase [Sphingomonas sp. 1F27F7B] diamond 393 259 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp. 1F27F7B
15013782 15013782 PRJEB20058_S_NODE_4392_length_300_cov_4.849372_g4354_i0 PRJEB20058 4392 300 4.849372 14.548116 Caulobacter sp. CCUG 6 78 Bacteria Bacteria 195 1.6599999999999997e-57   NR WP_242923344.1 2100090 g4354 i0 97.8 0.92 92 2 92 0 23 298 435 526 WP_242923344.1 M28 family metallopeptidase [Caulobacter sp. CCUG 60055] diamond 276 195 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter sp. CCUG 60055
15324894 15324894 PRJEB20058_S_NODE_3693_length_338_cov_2.476534_g3655_i0 PRJEB20058 3693 338 2.476534 8.37068492 Caulobacter sp. CCUG 6 78 Bacteria Bacteria 224 2.88e-73   NR WP_242919347.1 2100090 g3655 i0 99.1 0.994082840236686 112 1 99.4 0 2 337 2 113 WP_242919347.1 PaaI family thioesterase [Caulobacter sp. CCUG 60055] diamond 336 224 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter sp. CCUG 60055
16288592 16288592 PRJEB20058_S_NODE_2793_length_399_cov_2.396450_g2755_i0 PRJEB20058 2793 399 2.39645 9.5618355 Acidovorax 12916 Bacteria Bacteria 181 4.84e-50   NR WP_296017479.1 158751 g2755 i0 70.7 2 133 39 100 0 1 399 199 331 WP_296017479.1 EAL domain-containing protein [uncultured Acidovorax sp.] diamond 798 181 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax uncultured Acidovorax sp.
16288635 16288635 PRJEB20058_S_NODE_5893_length_245_cov_2.157609_g5855_i0 PRJEB20058 5893 245 2.157609 5.28614205 uncultured Sphingomonas sp. 158754 Bacteria Bacteria 149 1.23e-44   NR WP_300596861.1 158754 g5855 i0 100 0.881632653061225 72 0 88.2 0 224 9 1 72 WP_300596861.1 hypothetical protein [uncultured Sphingomonas sp.] diamond 216 149 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas uncultured Sphingomonas sp.
16599479 16599479 PRJEB20058_S_NODE_1274_length_610_cov_2.590164_g1236_i0 PRJEB20058 1274 610 2.590164 15.8000004 Caulobacter sp. CCUG 6 78 Bacteria Bacteria 152 1.71e-44   NR WP_242917702.1 2100090 g1236 i0 100 0.373770491803279 76 0 37.4 0 547 320 1 76 WP_242917702.1 hypothetical protein [Caulobacter sp. CCUG 60055] diamond 228 152 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter sp. CCUG 60055
16599532 16599532 PRJEB20058_S_NODE_3614_length_343_cov_2.152482_g3576_i0 PRJEB20058 3614 343 2.152482 7.38301326 Caulobacter sp. CCUG 6 78 Bacteria Bacteria 182 3.5e-52   NR WP_242920247.1 2100090 g3576 i0 99 0.865889212827988 99 1 86.6 0 297 1 198 296 WP_242920247.1 ATP-binding protein [Caulobacter sp. CCUG 60055] diamond 297 182 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter sp. CCUG 60055
17874302 17874302 PRJEB20058_S_NODE_2095_length_470_cov_2.317848_g2057_i0 PRJEB20058 2095 470 2.317848 10.8938856 Phyllobacterium myrsinacearum 28101 Bacteria Bacteria 275 7.049999999999998e-88   NR WP_245457915.1 28101 g2057 i0 100 0.9 141 0 90 0 25 447 337 477 WP_245457915.1 ATP-binding protein [Phyllobacterium myrsinacearum] diamond 423 275 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium myrsinacearum
17874385 17874385 PRJEB20058_S_NODE_4995_length_275_cov_0.897196_g4957_i0 PRJEB20058 4995 275 0.897196 2.467289 Pseudomonadota 1224 Bacteria Bacteria 182 7.44e-58   NR WP_204311854.1 562 g4957 i0 100 1.98545454545455 91 0 99.3 0 2 274 2 92 WP_204311854.1 ImmA/IrrE family metallo-endopeptidase, partial [Escherichia coli] diamond 546 182 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
17874406 17874406 PRJEB20058_S_NODE_5935_length_244_cov_1.278689_g5897_i0 PRJEB20058 5935 244 1.278689 3.12000116 Bradyrhizobium jicamae 280332 Bacteria Bacteria 127 2.17e-32   NR WP_212494835.1 280332 g5897 i0 83.8 1.9672131147541 80 13 98.4 0 241 2 299 378 WP_212494835.1 pyruvate kinase [Bradyrhizobium jicamae] diamond 480 127 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium jicamae
19148143 19148143 PRJEB20058_S_NODE_1036_length_670_cov_4.916256_g999_i0 PRJEB20058 1036 670 4.916256 32.9389152 Caldimonas caldifontis 1452508 Bacteria Bacteria 262 1.28e-85   NR PPE65673.1 1452508 g999 i0 69.3 1.59850746268657 176 54 78.8 0 652 125 32 207 PPE65673.1 hypothetical protein C1704_13680 [Caldimonas caldifontis] diamond 1071 262 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Caldimonas Caldimonas caldifontis
19148146 19148146 PRJEB20058_S_NODE_1116_length_645_cov_3.770548_g1079_i0 PRJEB20058 1116 645 3.770548 24.3200346 Burkholderiales 80840 Bacteria Bacteria 338 7.899999999999999e-110   NR WP_005793964.1 47920 g1079 i0 81.6 14.3116279069767 206 38 95.8 0 7 624 50 255 WP_005793964.1 SurA N-terminal domain-containing protein [Acidovorax delafieldii] diamond 9231 338 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax Acidovorax delafieldii
19148178 19148178 PRJEB20058_S_NODE_2116_length_468_cov_2.926290_g2078_i0 PRJEB20058 2116 468 2.92629 13.6950372 Phyllobacterium myrsinacearum 28101 Bacteria Bacteria 237 3.15e-77   NR RZS88468.1 28101 g2078 i0 100 0.782051282051282 122 0 78.2 0 387 22 1 122 RZS88468.1 transcription elongation GreA/GreB family factor [Phyllobacterium myrsinacearum] diamond 366 237 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium myrsinacearum
19148225 19148225 PRJEB20058_S_NODE_36_length_2099_cov_4.238469_g34_i0 PRJEB20058 36 2099 4.238469 88.96546431 Acidovorax 12916 Bacteria Bacteria 394 1.0999999999999999e-129   NR WP_343735563.1 1872122 g34 i0 75.7 3.76036207717961 263 63 37.6 1 1892 1104 1 262 WP_343735563.1 3',5'-cyclic-nucleotide phosphodiesterase [Acidovorax sp.] diamond 7893 396 0.994949494949495 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax Acidovorax sp.
19148234 19148234 PRJEB20058_S_NODE_3936_length_324_cov_2.574144_g3898_i0 PRJEB20058 3936 324 2.574144 8.34022656 Pelomicrobium methylotrophicum 2602750 Bacteria Bacteria 140 5.429999999999999e-37   NR WP_147800898.1 2602750 g3898 i0 98.6 0.685185185185185 74 1 68.5 0 323 102 428 501 WP_147800898.1 anthranilate synthase component I [Pelomicrobium methylotrophicum] diamond 222 140 1 Bacteria   Pseudomonadati Pseudomonadota Hydrogenophilia     Pelomicrobium Pelomicrobium methylotrophicum
19148246 19148246 PRJEB20058_S_NODE_4256_length_306_cov_2.926531_g4218_i0 PRJEB20058 4256 306 2.926531 8.95518486 Phyllobacterium sp. 628 2718938 Bacteria Bacteria 134 6.85e-34   NR WP_188346744.1 2718938 g4218 i0 95.5 1.29411764705882 66 3 64.7 0 108 305 1 66 WP_188346744.1 FdhF/YdeP family oxidoreductase [Phyllobacterium sp. 628] diamond 396 134 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium sp. 628
19148260 19148260 PRJEB20058_S_NODE_476_length_930_cov_3.550058_g459_i0 PRJEB20058 476 930 3.550058 33.0155394 Caulobacter sp. CCUG 6 78 Bacteria Bacteria 181 5.76e-51   NR WP_242918951.1 2100090 g459 i0 100 0.267741935483871 83 0 26.8 0 272 24 4 86 WP_242918951.1 DUF5996 family protein [Caulobacter sp. CCUG 60055] diamond 249 181 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter sp. CCUG 60055
20423406 20423406 PRJEB20058_S_NODE_2897_length_392_cov_1.558912_g2859_i0 PRJEB20058 2897 392 1.558912 6.11093504 Phyllobacterium myrsinacearum 28101 Bacteria Bacteria 261 3.47e-84   NR WP_130272243.1 28101 g2859 i0 99.2 0.994897959183674 130 1 99.5 0 391 2 214 343 WP_130272243.1 D-alanyl-D-alanine carboxypeptidase [Phyllobacterium myrsinacearum] diamond 390 261 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium myrsinacearum
20423420 20423420 PRJEB20058_S_NODE_3317_length_362_cov_1.677741_g3279_i0 PRJEB20058 3317 362 1.677741 6.07342242 Pelomonas aquatica 431058 Bacteria Bacteria 256 2.82e-76   NR WP_268154221.1 431058 g3279 i0 96.6 0.977900552486188 118 4 97.8 0 359 6 915 1032 WP_268154221.1 RHS repeat domain-containing protein [Pelomonas aquatica] diamond 354 256 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Roseateles Pelomonas aquatica
20423480 20423480 PRJEB20058_S_NODE_5597_length_254_cov_1.937824_g5559_i0 PRJEB20058 5597 254 1.937824 4.92207296 Acidovorax 12916 Bacteria Bacteria 144 1.12e-37   NR WP_409777300.1 1872122 g5559 i0 81 1.98425196850394 84 16 99.2 0 252 1 333 416 WP_409777300.1 EAL domain-containing protein [Acidovorax sp.] diamond 504 145 0.993103448275862 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax Acidovorax sp.
21388063 21388063 PRJEB20058_S_NODE_4957_length_276_cov_2.097674_g4919_i0 PRJEB20058 4957 276 2.097674 5.78958024 Phyllobacterium 28100 Bacteria Bacteria 106 3.09e-26   NR WP_106713163.1 314235 g4919 i0 88.5 2.03260869565217 61 7 66.3 0 276 94 150 210 WP_106713163.1 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Phyllobacterium brassicacearum] diamond 561 107 0.990654205607477 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium brassicacearum
21699456 21699456 PRJEB20058_S_NODE_3838_length_329_cov_2.309701_g3800_i0 PRJEB20058 3838 329 2.309701 7.59891629 Caulobacter sp. CCUG 6 78 Bacteria Bacteria 205 1.51e-64   NR WP_242917704.1 2100090 g3800 i0 99.1 0.993920972644377 109 1 99.4 0 3 329 126 234 WP_242917704.1 helix-turn-helix domain-containing protein [Caulobacter sp. CCUG 60055] diamond 327 205 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter sp. CCUG 60055
21699501 21699501 PRJEB20058_S_NODE_5998_length_242_cov_2.254144_g5960_i0 PRJEB20058 5998 242 2.254144 5.45502848 Acidovorax 12916 Bacteria Bacteria 102 5.09e-24   NR WP_291471837.1 1872122 g5960 i0 63.3 3.9297520661157 79 29 97.9 0 241 5 167 245 WP_291471837.1 deoxyribodipyrimidine photo-lyase, partial [Acidovorax sp.] diamond 951 102 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax Acidovorax sp.
21699549 21699549 PRJEB20058_S_NODE_878_length_721_cov_3.580303_g844_i0 PRJEB20058 878 721 3.580303 25.81398463 uncultured Neisseria sp. 237778 Bacteria Bacteria 473 8.079999999999998e-156   NR WP_297958283.1 237778 g844 i0 100 0.957004160887656 230 0 95.7 0 711 22 795 1024 WP_297958283.1 glycosyltransferase [uncultured Neisseria sp.] diamond 690 473 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria uncultured Neisseria sp.
23938276 23938276 PRJEB20058_S_NODE_39_length_2072_cov_5.679761_g37_i0 PRJEB20058 39 2072 5.679761 117.68464792 Pseudomonas fluorescens 294 Bacteria Bacteria 897 0   NR WP_106118099.1 294 g37 i0 100 0.651544401544402 450 0 65.2 0 1927 578 1 450 WP_106118099.1 hypothetical protein [Pseudomonas fluorescens] diamond 1350 897 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas fluorescens
24248505 24248505 PRJEB20058_S_NODE_140_length_1436_cov_7.804364_g136_i0 PRJEB20058 140 1436 7.804364 112.07066704 Delftia acidovorans 80866 Bacteria Bacteria 479 2.609999999999999e-165   NR WP_333906700.1 80866 g136 i0 99.6 0.472144846796657 226 1 47.2 0 1435 758 88 313 WP_333906700.1 RHS repeat-associated core domain-containing protein, partial [Delftia acidovorans] diamond 678 479 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Delftia Delftia acidovorans
24248506 24248506 PRJEB20058_S_NODE_1420_length_573_cov_3.369141_g1382_i0 PRJEB20058 1420 573 3.369141 19.30517793 uncultured Brevundimonas sp. 213418 Bacteria Bacteria 296 7.88e-97   NR WP_296171989.1 213418 g1382 i0 86.3 0.916230366492147 175 24 91.6 0 541 17 93 267 WP_296171989.1 DUF6880 family protein [uncultured Brevundimonas sp.] diamond 525 296 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Brevundimonas uncultured Brevundimonas sp.
24248508 24248508 PRJEB20058_S_NODE_160_length_1345_cov_5.307632_g155_i0 PRJEB20058 160 1345 5.307632 71.3876504 Brucella rhizosphaerae 571254 Bacteria Bacteria 417 3.19e-141   NR WP_024898766.1 571254 g155 i0 60.8 0.740520446096654 332 123 72.7 3 59 1036 1 331 WP_024898766.1 hypothetical protein [Brucella rhizosphaerae] diamond 996 417 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Brucellaceae Brucella Brucella rhizosphaerae
24248534 24248534 PRJEB20058_S_NODE_2720_length_404_cov_4.676385_g2682_i0 PRJEB20058 2720 404 4.676385 18.8925954 Geminicoccaceae bacterium 2448052 Bacteria Bacteria 153 1.97e-44   NR MFL5333435.1 2448052 g2682 i0 74.3 0.809405940594059 109 27 80.9 1 56 382 1 108 MFL5333435.1 TlpA family protein disulfide reductase [Geminicoccaceae bacterium] diamond 327 153 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Geminicoccales Geminicoccaceae   Geminicoccaceae bacterium
24248607 24248607 PRJEB20058_S_NODE_6160_length_237_cov_1.795455_g6122_i0 PRJEB20058 6160 237 1.795455 4.25522835 Caulobacter sp. CCUG 6 78 Bacteria Bacteria 139 1.99e-40   NR WP_242920481.1 2100090 g6122 i0 100 0.911392405063291 72 0 91.1 0 220 5 13 84 WP_242920481.1 YciI family protein [Caulobacter sp. CCUG 60055] diamond 216 139 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter sp. CCUG 60055
24248649 24248649 PRJEB20058_S_NODE_840_length_733_cov_2.626488_g807_i0 PRJEB20058 840 733 2.626488 19.25215704 Rhizobium sp. 16-488-2b 2819991 Bacteria Bacteria 205 4.66e-64   NR WP_209215422.1 2819991 g807 i0 93.6 0.446111869031378 109 7 44.6 0 327 1 1 109 WP_209215422.1 thermonuclease family protein [Rhizobium sp. 16-488-2b] diamond 327 205 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Rhizobiaceae Rhizobium Rhizobium sp. 16-488-2b
25512743 25512743 PRJEB20058_P_NODE_10017_length_1319_cov_2.866455_g8573_i0 PRJEB20058 10017 1319 2.866455 37.80854145 Pseudomonadota 1224 Bacteria Bacteria 181 3.27e-52   NR WP_305237740.1 244366 g8573 i0 83.6 0.66868840030326 110 18 25 0 542 213 1 110 WP_305237740.1 H-NS family nucleoid-associated regulatory protein, partial [Klebsiella variicola] diamond 882 182 0.994505494505495 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella Klebsiella variicola
25512791 25512791 PRJEB20058_P_NODE_101241_length_404_cov_7.658892_g98434_i0 PRJEB20058 101241 404 7.658892 30.94192368 Vibrio sp. 678 Bacteria Bacteria 121 1.91e-29   NR WP_287025976.1 678 g98434 i0 100 0.438118811881188 59 0 43.8 0 27 203 430 488 WP_287025976.1 RimK family protein [Vibrio sp.] diamond 177 121 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales Vibrionaceae Vibrio Vibrio sp.
25512792 25512792 PRJEB20058_P_NODE_101249_length_404_cov_7.154519_g98442_i0 PRJEB20058 101249 404 7.154519 28.90425676 Phyllobacterium myrsinacearum 28101 Bacteria Bacteria 201 4.46e-64   NR WP_130273087.1 28101 g98442 i0 99 0.75 101 1 75 0 91 393 1 101 WP_130273087.1 winged helix-turn-helix transcriptional regulator [Phyllobacterium myrsinacearum] diamond 303 201 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium myrsinacearum
25512797 25512797 PRJEB20058_P_NODE_101361_length_404_cov_2.836735_g98554_i0 PRJEB20058 101361 404 2.836735 11.4604094 Methyloversatilis discipulorum 1119528 Bacteria Bacteria 218 2.37e-68   NR WP_020163984.1 1119528 g98554 i0 96.5 0.853960396039604 115 4 85.4 0 362 18 1 115 WP_020163984.1 GlxA family transcriptional regulator [Methyloversatilis discipulorum] diamond 345 218 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Sterolibacteriaceae Methyloversatilis Methyloversatilis discipulorum
25512798 25512798 PRJEB20058_P_NODE_10137_length_1310_cov_5.868695_g8684_i0 PRJEB20058 10137 1310 5.868695 76.8799045 Pseudomonadota bacterium 1977087 Bacteria Bacteria 456 1.51e-153   NR MEW6596225.1 1977087 g8684 i0 98.6 0.506106870229008 221 3 50.6 0 677 15 1 221 MEW6596225.1 choline dehydrogenase [Pseudomonadota bacterium] diamond 663 456 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
25512851 25512851 PRJEB20058_P_NODE_102697_length_401_cov_2.288235_g99890_i0 PRJEB20058 102697 401 2.288235 9.17582235 Pseudomonadota 1224 Bacteria Bacteria 239 5.83e-71   NR WP_061470312.1 434 g99890 i0 83.3 2.96259351620948 132 22 98.8 0 1 396 472 603 WP_061470312.1 MULTISPECIES: class I SAM-dependent DNA methyltransferase [Acetobacter] diamond 1188 239 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Acetobacterales Acetobacteraceae Acetobacter  
25512871 25512871 PRJEB20058_P_NODE_103153_length_400_cov_2.138643_g100346_i0 PRJEB20058 103153 400 2.138643 8.554572 Phyllobacterium calauticae 2817027 Bacteria Bacteria 242 1.7400000000000002e-77   NR WP_223611677.1 2817027 g100346 i0 93.9 0.99 132 8 99 0 3 398 100 231 WP_223611677.1 zinc-binding alcohol dehydrogenase family protein [Phyllobacterium calauticae] diamond 396 242 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium calauticae
25512877 25512877 PRJEB20058_P_NODE_10329_length_1297_cov_5.396440_g8859_i0 PRJEB20058 10329 1297 5.39644 69.9918268 Burkholderiales bacterium 1891238 Bacteria Bacteria 768 2.62e-278   NR RTL15808.1 1891238 g8859 i0 99.5 0.927525057825752 401 2 92.8 0 1221 19 1 401 RTL15808.1 MAG: M48 family peptidase [Burkholderiales bacterium] diamond 1203 768 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales     Burkholderiales bacterium
25512890 25512890 PRJEB20058_P_NODE_103585_length_399_cov_1.760355_g100778_i0 PRJEB20058 103585 399 1.760355 7.02381645 Aquabacterium soli 2493092 Bacteria Bacteria 216 2.7399999999999997e-66   NR WP_125242637.1 2493092 g100778 i0 81.6 0.93984962406015 125 23 94 0 377 3 172 296 WP_125242637.1 oxygenase MpaB family protein [Aquabacterium soli] diamond 375 216 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales   Aquabacterium Aquabacterium soli
25513012 25513012 PRJEB20058_P_NODE_106065_length_393_cov_9.783133_g103257_i0 PRJEB20058 106065 393 9.783133 38.44771269 Caulobacter sp. CCUG 6 78 Bacteria Bacteria 249 1.75e-78   NR WP_242917921.1 2100090 g103257 i0 98.3 0.900763358778626 118 2 90.1 0 371 18 356 473 WP_242917921.1 putative 2OG-Fe(II) oxygenase [Caulobacter sp. CCUG 60055] diamond 354 249 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter sp. CCUG 60055
25513022 25513022 PRJEB20058_P_NODE_106241_length_393_cov_2.780120_g103433_i0 PRJEB20058 106241 393 2.78012 10.9258716 Burkholderia sp. 36773 Bacteria Bacteria 192 2.57e-58   NR MCA3862055.1 36773 g103433 i0 69.3 3.88549618320611 127 39 96.9 0 386 6 93 219 MCA3862055.1 formylglycine-generating enzyme family protein [Burkholderia sp.] diamond 1527 192 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Burkholderia Burkholderia sp.
25513032 25513032 PRJEB20058_P_NODE_106345_length_393_cov_1.641566_g103537_i0 PRJEB20058 106345 393 1.641566 6.45135438 Acinetobacter lwoffii 28090 Bacteria Bacteria 242 9.38e-78   NR WP_191113085.1 28090 g103537 i0 99.2 0.938931297709924 123 1 93.9 0 377 9 183 305 WP_191113085.1 replication initiation protein RepM [Acinetobacter lwoffii] diamond 369 242 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Moraxellales Moraxellaceae Acinetobacter Acinetobacter lwoffii
25513068 25513068 PRJEB20058_P_NODE_10697_length_1273_cov_15.710396_g9192_i0 PRJEB20058 10697 1273 15.710396 199.99334108 Caulobacter sp. CCUG 6 78 Bacteria Bacteria 294 3.87e-95   NR WP_242921621.1 2100090 g9192 i0 97.8 0.325216025137471 138 3 32.5 0 852 1265 1 138 WP_242921621.1 hypothetical protein [Caulobacter sp. CCUG 60055] diamond 414 294 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter sp. CCUG 60055
25513086 25513086 PRJEB20058_P_NODE_107393_length_390_cov_42.729483_g104584_i0 PRJEB20058 107393 390 42.729483 166.6449837 Rhizomicrobium 1241326 Bacteria Bacteria 96.3 4.03e-21   NR MDE2182988.1 1913988 g104584 i0 77.4 2.39230769230769 62 14 47.7 0 365 180 226 287 MDE2182988.1 carboxylating nicotinate-nucleotide diphosphorylase [Alphaproteobacteria bacterium] diamond 933 96.7 0.995863495346432 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria       Alphaproteobacteria bacterium
25513136 25513136 PRJEB20058_P_NODE_108641_length_388_cov_2.507645_g105830_i0 PRJEB20058 108641 388 2.507645 9.7296626 Mesorhizobium sp. 1871066 Bacteria Bacteria 189 2.3299999999999998e-54   NR MET0597319.1 1871066 g105830 i0 71.1 0.989690721649485 128 29 92.8 1 381 22 279 406 MET0597319.1 malto-oligosyltrehalose trehalohydrolase [Mesorhizobium sp.] diamond 384 189 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Mesorhizobium Mesorhizobium sp.
25513167 25513167 PRJEB20058_P_NODE_109449_length_386_cov_2.932308_g106638_i0 PRJEB20058 109449 386 2.932308 11.31870888 Tepidimonas fonticaldi 1101373 Bacteria Bacteria 97.8 2.6200000000000003e-21   NR WP_068606314.1 1101373 g106638 i0 91.7 0.373056994818653 48 4 37.3 0 6 149 306 353 WP_068606314.1 homocysteine S-methyltransferase family protein [Tepidimonas fonticaldi] diamond 144 97.8 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales   Tepidimonas Tepidimonas fonticaldi
25513169 25513169 PRJEB20058_P_NODE_109497_length_386_cov_2.304615_g106686_i0 PRJEB20058 109497 386 2.304615 8.8958139 Phyllobacterium myrsinacearum 28101 Bacteria Bacteria 250 1.41e-82   NR WP_130272996.1 28101 g106686 i0 100 0.955958549222798 123 0 95.6 0 385 17 28 150 WP_130272996.1 TetR/AcrR family transcriptional regulator [Phyllobacterium myrsinacearum] diamond 369 250 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium myrsinacearum
25513188 25513188 PRJEB20058_P_NODE_109961_length_385_cov_2.361111_g107150_i0 PRJEB20058 109961 385 2.361111 9.09027735 Bacteria 2 Bacteria Bacteria 119 1.72e-29   NR HXC40541.1 1891238 g107150 i0 81.2 4.83896103896104 69 13 53.8 0 362 156 301 369 HXC40541.1 DNA polymerase III subunit beta [Burkholderiales bacterium] diamond 1863 119 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales     Burkholderiales bacterium
25513202 25513202 PRJEB20058_P_NODE_11017_length_1253_cov_20.546141_g9491_i0 PRJEB20058 11017 1253 20.546141 257.44314673 Acidovorax sp. 1872122 Bacteria Bacteria 451 7.019999999999999e-155   NR WP_409888843.1 1872122 g9491 i0 67.2 4.03431763766959 335 108 80.2 2 38 1042 1 333 WP_409888843.1 metal-dependent hydrolase [Acidovorax sp.] diamond 5055 451 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax Acidovorax sp.
25513240 25513240 PRJEB20058_P_NODE_111057_length_382_cov_26.461059_g108245_i0 PRJEB20058 111057 382 26.461059 101.08124538 Methyloversatilis discipulorum 1119528 Bacteria Bacteria 191 1.98e-53   NR WP_019917559.1 1119528 g108245 i0 90.3 0.887434554973822 113 11 88.7 0 23 361 107 219 WP_019917559.1 PAS domain S-box protein [Methyloversatilis discipulorum] diamond 339 191 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Sterolibacteriaceae Methyloversatilis Methyloversatilis discipulorum
25513307 25513307 PRJEB20058_P_NODE_112297_length_380_cov_2.018809_g109484_i0 PRJEB20058 112297 380 2.018809 7.6714742 Caulobacter sp. CCUG 6 78 Bacteria Bacteria 138 1.14e-35   NR WP_242921509.1 2100090 g109484 i0 100 0.552631578947368 70 0 55.3 0 2 211 430 499 WP_242921509.1 exodeoxyribonuclease VII large subunit [Caulobacter sp. CCUG 60055] diamond 210 138 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter sp. CCUG 60055
25513329 25513329 PRJEB20058_P_NODE_112681_length_379_cov_3.053459_g109868_i0 PRJEB20058 112681 379 3.053459 11.57260961 Caulobacter sp. CCUG 6 78 Bacteria Bacteria 227 4.62e-70   NR WP_242922890.1 2100090 g109868 i0 100 0.862796833773087 109 0 86.3 0 378 52 368 476 WP_242922890.1 amidase [Caulobacter sp. CCUG 60055] diamond 327 227 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter sp. CCUG 60055
25513439 25513439 PRJEB20058_P_NODE_115289_length_373_cov_87.134615_g112474_i0 PRJEB20058 115289 373 87.134615 325.01211395 Phyllobacterium calauticae 2817027 Bacteria Bacteria 225 5.71e-69   NR WP_223614325.1 2817027 g112474 i0 86.2 0.989276139410188 123 15 97.3 1 366 4 13 135 WP_223614325.1 amidohydrolase family protein [Phyllobacterium calauticae] diamond 369 225 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium calauticae
25513449 25513449 PRJEB20058_P_NODE_115417_length_373_cov_8.849359_g112602_i0 PRJEB20058 115417 373 8.849359 33.00810907 Psychromonas aquatilis 2005072 Bacteria Bacteria 218 6.1099999999999984e-68   NR WP_341596477.1 2005072 g112602 i0 97.3 0.892761394101877 111 3 89.3 0 18 350 40 150 WP_341596477.1 N-acetyltransferase DgcN [Psychromonas aquatilis] diamond 333 218 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Alteromonadales Psychromonadaceae Psychromonas Psychromonas aquatilis
25513450 25513450 PRJEB20058_P_NODE_11545_length_1223_cov_9.922547_g9977_i0 PRJEB20058 11545 1223 9.922547 121.35274981 Phyllobacterium myrsinacearum 28101 Bacteria Bacteria 464 7.949999999999998e-162   NR WP_342588451.1 28101 g9977 i0 98.3 0.576451349141455 235 4 57.6 0 21 725 15 249 WP_342588451.1 GNAT family N-acetyltransferase [Phyllobacterium myrsinacearum] diamond 705 464 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium myrsinacearum
25513480 25513480 PRJEB20058_P_NODE_11609_length_1220_cov_3.970664_g10036_i0 PRJEB20058 11609 1220 3.970664 48.4421008 Crenobacter intestini 2563443 Bacteria Bacteria 417 1.25e-142   NR WP_168929146.1 2563443 g10036 i0 98.2 0.548360655737705 223 4 54.8 0 669 1 1 223 WP_168929146.1 energy transducer TonB [Crenobacter intestini] diamond 669 417 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Crenobacter Crenobacter intestini
25513484 25513484 PRJEB20058_P_NODE_116185_length_372_cov_1.964630_g113370_i0 PRJEB20058 116185 372 1.96463 7.3084236 Brevundimonas 41275 Bacteria Bacteria 90.1 2.28e-20   NR WP_292079826.1 41275 g113370 i0 76.8 0.451612903225806 56 13 45.2 0 197 364 65 120 WP_292079826.1 MULTISPECIES: hypothetical protein [Brevundimonas] diamond 168 90.1 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Brevundimonas  

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;