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contig_metadata

26 rows where analysis = "diamond", bioproject = "PRJEB20058" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 26 ✖

tax_clade 1

bioproject 1

  • PRJEB20058 · 26 ✖

analysis 1

  • diamond · 26 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25792559 25792559 PRJEB20058_P_NODE_53947_length_572_cov_10.708415_g51206_i0 PRJEB20058 53947 572 10.708415 61.2521338 Phytophthora pseudosyringae 221518 SAR_Eukaryotes SAR_Eukaryotes 259 8.05e-82   NR KAG7382785.1 221518 g51206 i0 72.7 4.83041958041958 187 46 96 2 549 1 71 256 KAG7382785.1 regulator of nonsense transcription [Phytophthora pseudosyringae] diamond 2763 259 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora pseudosyringae
25928388 25928388 PRJEB20058_P_NODE_47028_length_613_cov_59.710145_g44327_i0 PRJEB20058 47028 613 59.710145 366.02318885 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 114 1.52e-25   NR KAG2522616.1 325452 g44327 i0 52.8 3.62153344208809 106 50 51.9 0 585 268 600 705 KAG2522616.1 hypothetical protein JM16_003408 [Phytophthora kernoviae] diamond 2220 114 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora kernoviae
26331003 26331003 PRJEB20058_P_NODE_143375_length_323_cov_20.007634_g140554_i0 PRJEB20058 143375 323 20.007634 64.62465782 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 76.3 1.8e-15   NR YP_009167020.1 114742 g140554 i0 52.6 2.1733746130031 78 37 72.4 0 76 309 10 87 YP_009167020.1 NADH dehydrogenase subunit 4L [Pythium insidiosum] diamond 702 76.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
32910578 32910578 PRJEB20058_P_NODE_140025_length_328_cov_44.779026_g137204_i0 PRJEB20058 140025 328 44.779026 146.87520528 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 63.5 2.47e-9   NR KAF0694661.1 120398 g137204 i0 57.9 0.521341463414634 57 24 52.1 0 284 114 197 253 KAF0694661.1 hypothetical protein As57867_014446 [Aphanomyces stellatus] diamond 171 63.5 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
32922715 32922715 PRJEB20058_P_NODE_102265_length_402_cov_2.252199_g99458_i0 PRJEB20058 102265 402 2.252199 9.05383998 Saprolegniales 4763 SAR_Eukaryotes SAR_Eukaryotes 141 2.95e-40   NR OQS00817.1 74557 g99458 i0 62.3 10.2611940298507 114 43 85.1 0 20 361 22 135 OQS00817.1 60S ribosomal protein L32-1 [Thraustotheca clavata] diamond 4125 141 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
32922746 32922746 PRJEB20058_P_NODE_132745_length_341_cov_2.542857_g129925_i0 PRJEB20058 132745 341 2.542857 8.67114237 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 59.3 1.61e-7   NR RLN45717.1 325452 g129925 i0 81.8 1.74193548387097 33 6 29 0 313 215 348 380 RLN45717.1 hypothetical protein BBI17_005902 [Phytophthora kernoviae] diamond 594 59.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora kernoviae
32940013 32940013 PRJEB20058_P_NODE_176177_length_280_cov_3.762557_g173354_i0 PRJEB20058 176177 280 3.762557 10.5351596 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 67.4 8.75e-11   NR KAF1794368.1 29920 g173354 i0 66.7 3.66428571428571 42 14 45 0 56 181 1 42 KAF1794368.1 hypothetical protein GQ600_2384 [Phytophthora cactorum] diamond 1026 67.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum
32945587 32945587 PRJEB20058_P_NODE_46170_length_619_cov_4.593190_g43473_i0 PRJEB20058 46170 619 4.59319 28.4318461 Peronospora farinosa 134698 SAR_Eukaryotes SAR_Eukaryotes 312 1.81e-94   NR CAI5724092.1 134698 g43473 i0 95.4 1.69628432956381 175 6 83.8 1 618 100 2126 2300 CAI5724092.1 unnamed protein product [Peronospora farinosa] diamond 1050 312 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora farinosa
32962356 32962356 PRJEB20058_P_NODE_179050_length_277_cov_2.060185_g176227_i0 PRJEB20058 179050 277 2.060185 5.70671245 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 44.7 0.0115   NR KAF0688124.1 120398 g176227 i0 35.7 0.75812274368231 70 39 69.3 1 245 54 371 440 KAF0688124.1 hypothetical protein As57867_020164 [Aphanomyces stellatus] diamond 210 44.7 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
32962667 32962667 PRJEB20058_P_NODE_236434_length_223_cov_4.740741_g233609_i0 PRJEB20058 236434 223 4.740741 10.57185243 Peronospora belbahrii 622444 SAR_Eukaryotes SAR_Eukaryotes 92.4 3.44e-22   NR CAH0475341.1 622444 g233609 i0 71.6 0.901345291479821 67 17 90.1 2 223 23 21 85 CAH0475341.1 unnamed protein product [Peronospora belbahrii] diamond 201 92.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora belbahrii
32979047 32979047 PRJEB20058_P_NODE_110387_length_384_cov_2.606811_g107575_i0 PRJEB20058 110387 384 2.606811 10.01015424 Globisporangium splendens 82926 SAR_Eukaryotes SAR_Eukaryotes 155 3.29e-41   NR KAF1334048.1 82926 g107575 i0 83 1.3671875 88 15 68.8 0 376 113 626 713 KAF1334048.1 Trehalase, partial [Globisporangium splendens] diamond 525 155 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
32979214 32979214 PRJEB20058_P_NODE_137315_length_333_cov_3.996324_g134494_i0 PRJEB20058 137315 333 3.996324 13.30775892 Globisporangium ultimum 2052682 SAR_Eukaryotes SAR_Eukaryotes 140 5.99e-39   NR YP_003734820.1 2052682 g134494 i0 91 0.702702702702703 78 7 70.3 0 22 255 77 154 YP_003734820.1 orf245 [Globisporangium ultimum] diamond 234 140 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium ultimum
33008358 33008358 PRJEB20058_P_NODE_245651_length_203_cov_10.373239_g242826_i0 PRJEB20058 245651 203 10.373239 21.05767517 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 66.6 5.98e-11   NR XP_067742527.1 164328 g242826 i0 86.5 1.61083743842365 37 5 54.7 0 185 75 273 309 XP_067742527.1 uncharacterized protein KRP23_9349 [Phytophthora ramorum] diamond 327 66.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum
33025432 33025432 PRJEB20058_P_NODE_114828_length_374_cov_35.536741_g112013_i0 PRJEB20058 114828 374 35.536741 132.90741134 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 63.2 4.09e-10   NR KAG6967645.1 29920 g112013 i0 41 4.1951871657754 83 41 65.8 2 298 53 18 93 KAG6967645.1 hypothetical protein JG687_00004185 [Phytophthora cactorum] diamond 1569 63.5 0.995275590551181 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum
33030214 33030214 PRJEB20058_P_NODE_129820_length_346_cov_3.421053_g127001_i0 PRJEB20058 129820 346 3.421053 11.83684338 Phytophthora citrophthora 4793 SAR_Eukaryotes SAR_Eukaryotes 44.3 0.0346   NR KAK1946811.1 4793 g127001 i0 45.6 0.494219653179191 57 28 46.8 1 213 52 9 65 KAK1946811.1 Craniofacial development protein 2 [Phytophthora citrophthora] diamond 171 44.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora citrophthora
33042514 33042514 PRJEB20058_P_NODE_39644_length_668_cov_11.461285_g37010_i0 PRJEB20058 39644 668 11.461285 76.5613838 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 229 6.5e-72   NR XP_009536013.1 67593 g37010 i0 59.5 1.74251497005988 195 75 86.2 2 34 609 70 263 XP_009536013.1 hypothetical protein PHYSODRAFT_339745 [Phytophthora sojae] diamond 1164 229 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
33059584 33059584 PRJEB20058_P_NODE_61805_length_532_cov_236.991507_g59043_i0 PRJEB20058 61805 532 236.991507 1260.79481724 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 114 2.5099999999999996e-29   NR KAJ0391848.1 114742 g59043 i0 51.3 2.43609022556391 113 55 63.7 0 98 436 7 119 KAJ0391848.1 hypothetical protein P43SY_006045 [Pythium insidiosum] diamond 1296 114 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
33076614 33076614 PRJEB20058_P_NODE_60077_length_540_cov_38.787056_g57318_i0 PRJEB20058 60077 540 38.787056 209.4501024 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 55.8 2.72e-6   NR TMW67786.1 41045 g57318 i0 38.7 3.32222222222222 93 55 50.6 1 159 431 48 140 TMW67786.1 hypothetical protein Poli38472_007458 [Pythium oligandrum] diamond 1794 55.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
33081605 33081605 PRJEB20058_P_NODE_183022_length_272_cov_14.360190_g180199_i0 PRJEB20058 183022 272 14.36019 39.0597168 Bremia lactucae 4779 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.0289   NR XP_067815656.1 4779 g180199 i0 39.1 0.507352941176471 46 28 50.7 0 252 115 401 446 XP_067815656.1 hypothetical protein CCR75_009096 [Bremia lactucae] diamond 138 43.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
33098250 33098250 PRJEB20058_P_NODE_10926_length_1259_cov_17.828881_g9404_i0 PRJEB20058 10926 1259 17.828881 224.46561179 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 177 5.14e-46   NR GLD97938.1 114742 g9404 i0 39.7 0.569499602859412 239 133 54.6 4 27 713 172 409 GLD97938.1 hypothetical protein PINS_up006635 [Pythium insidiosum] diamond 717 177 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
33127680 33127680 PRJEB20058_P_NODE_112415_length_379_cov_48.783019_g109602_i0 PRJEB20058 112415 379 48.783019 184.88764201 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.0141   NR XP_067821031.1 4779 g109602 i0 47.4 2.98416886543536 57 23 41.2 2 74 229 50 104 XP_067821031.1 hypothetical protein CCR75_002175 [Bremia lactucae] diamond 1131 43.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
33132464 33132464 PRJEB20058_P_NODE_115735_length_373_cov_1.487179_g112920_i0 PRJEB20058 115735 373 1.487179 5.54717767 Globisporangium splendens 82926 SAR_Eukaryotes SAR_Eukaryotes 112 7.810000000000001e-26   NR KAF1336094.1 82926 g112920 i0 81.1 0.595174262734584 74 13 58.7 1 50 268 550 623 KAF1336094.1 Acyl-coa dehydrogenase family member 9, mitochondrial precursor, partial [Globisporangium splendens] diamond 222 112 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
33144768 33144768 PRJEB20058_P_NODE_106599_length_392_cov_5.791541_g103791_i0 PRJEB20058 106599 392 5.791541 22.70284072 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 122 3.5e-29   NR RAW31032.1 29920 g103791 i0 76 4.01785714285714 75 18 57.4 0 266 42 1 75 RAW31032.1 hypothetical protein PC110_g12609 [Phytophthora cactorum] diamond 1575 122 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum
33161739 33161739 PRJEB20058_P_NODE_152168_length_310_cov_12.767068_g149345_i0 PRJEB20058 152168 310 12.767068 39.5779108 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 99.4 1.11e-21   NR KAG1695779.1 4784 g149345 i0 81.4 5.16774193548387 59 11 57.1 0 11 187 706 764 KAG1695779.1 hypothetical protein DVH05_019118 [Phytophthora capsici] diamond 1602 100 0.994 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici
33161748 33161748 PRJEB20058_P_NODE_157576_length_303_cov_2.359504_g154753_i0 PRJEB20058 157576 303 2.359504 7.14929712 Globisporangium 1448052 SAR_Eukaryotes SAR_Eukaryotes 121 3e-30   NR KAF1322691.1 82926 g154753 i0 96.9 1.93069306930693 65 2 64.4 0 303 109 370 434 KAF1322691.1 Alcohol dehydrogenase 3, partial [Globisporangium splendens] diamond 585 122 0.991803278688525 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
33179061 33179061 PRJEB20058_P_NODE_175584_length_281_cov_1.645455_g172761_i0 PRJEB20058 175584 281 1.645455 4.62372855 Globisporangium 1448052 SAR_Eukaryotes SAR_Eukaryotes 70.1 1.37e-11   NR KAF1336683.1 82926 g172761 i0 100 4.44128113879004 32 0 34.2 0 3 98 466 497 KAF1336683.1 Nadh-ubiquinone oxidoreductase, partial [Globisporangium splendens] diamond 1248 70.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;