RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJEB20058" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 7 ✖

tax_clade 1

bioproject 1

  • PRJEB20058 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25655714 25655714 PRJEB20058_P_NODE_39978_length_665_cov_45.185430_g37339_i0 PRJEB20058 39978 665 45.18543 300.4831095 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 129 1.5999999999999998e-32   NR XP_004345946.1 1257118 g37339 i0 51.8 0.496240601503759 110 53 49.6 0 296 625 163 272 XP_004345946.1 uncharacterized protein ACA1_183360 [Acanthamoeba castellanii str. Neff] diamond 330 129 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
25886523 25886523 PRJEB20058_P_NODE_45115_length_626_cov_4.665487_g42427_i0 PRJEB20058 45115 626 4.665487 29.20594862 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 73.6 3.21e-11   NR XP_004336010.1 1257118 g42427 i0 41.8 0.469648562300319 98 51 44.1 3 116 391 321 418 XP_004336010.1 protein kinase domain containing protein [Acanthamoeba castellanii str. Neff] diamond 294 73.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32979221 32979221 PRJEB20058_P_NODE_138251_length_331_cov_36.592593_g135430_i0 PRJEB20058 138251 331 36.592593 121.12148283 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 48.5 9.02e-4   NR XP_004344706.1 1257118 g135430 i0 41.9 0.561933534743202 62 34 56.2 2 305 120 190 249 XP_004344706.1 MORN repeat-containing protein [Acanthamoeba castellanii str. Neff] diamond 186 48.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32996514 32996514 PRJEB20058_P_NODE_214475_length_246_cov_2.621622_g211651_i0 PRJEB20058 214475 246 2.621622 6.44919012 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 112 9.02e-30   NR XP_004333102.1 1257118 g211651 i0 74 0.890243902439024 73 19 89 0 27 245 58 130 XP_004333102.1 ribosomal protein L32, putative [Acanthamoeba castellanii str. Neff] diamond 219 112 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32996550 32996550 PRJEB20058_P_NODE_221403_length_241_cov_22.100000_g218578_i0 PRJEB20058 221403 241 22.1 53.261 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 44.3 0.0104   NR XP_004342052.1 1257118 g218578 i0 37.5 2.45228215767635 64 34 72.2 1 223 50 387 450 XP_004342052.1 dual specificity protein kinase [Acanthamoeba castellanii str. Neff] diamond 591 44.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
33116371 33116371 PRJEB20058_P_NODE_75175_length_479_cov_6.990431_g72397_i0 PRJEB20058 75175 479 6.990431 33.48416449 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 159 1.1999999999999999e-41   NR XP_004356787.1 1257118 g72397 i0 52.1 1.03340292275574 165 57 89.6 2 458 30 783 947 XP_004356787.1 IQGAPrelated protein [Acanthamoeba castellanii str. Neff] diamond 495 159 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
33132522 33132522 PRJEB20058_P_NODE_126263_length_352_cov_22.195876_g123444_i0 PRJEB20058 126263 352 22.195876 78.12948352 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 74.7 3.02e-14   NR XP_004349661.1 1257118 g123444 i0 60.7 0.477272727272727 56 22 47.7 0 15 182 85 140 XP_004349661.1 uncharacterized protein ACA1_315750 [Acanthamoeba castellanii str. Neff] diamond 168 74.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;